Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim2Q8R1G6 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Pdlim2Q8R1G6 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Pdlim2Q8R1G6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim2Q8R1G6 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim2Q8R1G6 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim2Q8R1G6 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.38■□□□□ 0.37
Pdlim2Q8R1G6 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim2Q8R1G6 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim2Q8R1G6 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim2Q8R1G6 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim2Q8R1G6 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim2Q8R1G6 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim2Q8R1G6 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.38■□□□□ 0.37
Pdlim2Q8R1G6 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim2Q8R1G6 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim2Q8R1G6 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim2Q8R1G6 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim2Q8R1G6 Gm8520-201ENSMUST00000186517 868 ntBASIC17.37■□□□□ 0.37
Pdlim2Q8R1G6 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.37■□□□□ 0.37
Pdlim2Q8R1G6 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.37■□□□□ 0.37
Pdlim2Q8R1G6 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim2Q8R1G6 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim2Q8R1G6 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Pdlim2Q8R1G6 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim2Q8R1G6 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim2Q8R1G6 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim2Q8R1G6 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim2Q8R1G6 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim2Q8R1G6 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim2Q8R1G6 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC17.37■□□□□ 0.37
Pdlim2Q8R1G6 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim2Q8R1G6 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim2Q8R1G6 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim2Q8R1G6 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdlim2Q8R1G6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pdlim2Q8R1G6 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pdlim2Q8R1G6 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdlim2Q8R1G6 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdlim2Q8R1G6 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pdlim2Q8R1G6 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdlim2Q8R1G6 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Pdlim2Q8R1G6 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Pdlim2Q8R1G6 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC17.36■□□□□ 0.37
Pdlim2Q8R1G6 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Pdlim2Q8R1G6 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pdlim2Q8R1G6 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pdlim2Q8R1G6 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.36■□□□□ 0.37
Pdlim2Q8R1G6 Gm20632-201ENSMUST00000176760 2427 ntBASIC17.36■□□□□ 0.37
Pdlim2Q8R1G6 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdlim2Q8R1G6 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim2Q8R1G6 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim2Q8R1G6 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim2Q8R1G6 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim2Q8R1G6 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim2Q8R1G6 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim2Q8R1G6 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim2Q8R1G6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim2Q8R1G6 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim2Q8R1G6 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim2Q8R1G6 Trmt13-210ENSMUST00000198454 880 ntBASIC17.35■□□□□ 0.37
Pdlim2Q8R1G6 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim2Q8R1G6 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim2Q8R1G6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim2Q8R1G6 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.35■□□□□ 0.37
Pdlim2Q8R1G6 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim2Q8R1G6 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim2Q8R1G6 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim2Q8R1G6 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim2Q8R1G6 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim2Q8R1G6 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim2Q8R1G6 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim2Q8R1G6 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim2Q8R1G6 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim2Q8R1G6 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim2Q8R1G6 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim2Q8R1G6 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim2Q8R1G6 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim2Q8R1G6 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim2Q8R1G6 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim2Q8R1G6 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim2Q8R1G6 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim2Q8R1G6 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Pdlim2Q8R1G6 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim2Q8R1G6 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim2Q8R1G6 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim2Q8R1G6 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC17.34■□□□□ 0.37
Pdlim2Q8R1G6 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim2Q8R1G6 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim2Q8R1G6 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim2Q8R1G6 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim2Q8R1G6 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim2Q8R1G6 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim2Q8R1G6 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim2Q8R1G6 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim2Q8R1G6 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim2Q8R1G6 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pdlim2Q8R1G6 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pdlim2Q8R1G6 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pdlim2Q8R1G6 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms