Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cystm1Q8K353 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cystm1Q8K353 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cystm1Q8K353 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cystm1Q8K353 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cystm1Q8K353 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC9.55□□□□□ -0.88
Cystm1Q8K353 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cystm1Q8K353 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cystm1Q8K353 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cystm1Q8K353 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Cystm1Q8K353 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Cystm1Q8K353 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Cystm1Q8K353 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cystm1Q8K353 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cystm1Q8K353 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cystm1Q8K353 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cystm1Q8K353 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cystm1Q8K353 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cystm1Q8K353 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cystm1Q8K353 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cystm1Q8K353 AC117194.1-201ENSMUST00000224847 3002 ntBASIC9.54□□□□□ -0.88
Cystm1Q8K353 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Gm8258-201ENSMUST00000055593 1449 ntBASIC9.54□□□□□ -0.88
Cystm1Q8K353 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Gm45203-201ENSMUST00000206384 1831 ntBASIC9.54□□□□□ -0.88
Cystm1Q8K353 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Cystm1Q8K353 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Gm26039-201ENSMUST00000158152 144 ntBASIC9.53□□□□□ -0.88
Cystm1Q8K353 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms