Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rtn1Q8K0T0 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Rtn1Q8K0T0 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rtn1Q8K0T0 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rtn1Q8K0T0 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rtn1Q8K0T0 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.47■□□□□ 0.39
Rtn1Q8K0T0 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rtn1Q8K0T0 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Rtn1Q8K0T0 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rtn1Q8K0T0 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtn1Q8K0T0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Rtn1Q8K0T0 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtn1Q8K0T0 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtn1Q8K0T0 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtn1Q8K0T0 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rtn1Q8K0T0 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rtn1Q8K0T0 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.46■□□□□ 0.39
Rtn1Q8K0T0 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtn1Q8K0T0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.46■□□□□ 0.39
Rtn1Q8K0T0 Gm13597-201ENSMUST00000121239 375 ntBASIC17.46■□□□□ 0.39
Rtn1Q8K0T0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.46■□□□□ 0.39
Rtn1Q8K0T0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rtn1Q8K0T0 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.46■□□□□ 0.39
Rtn1Q8K0T0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rtn1Q8K0T0 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtn1Q8K0T0 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Rtn1Q8K0T0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtn1Q8K0T0 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtn1Q8K0T0 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtn1Q8K0T0 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtn1Q8K0T0 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rtn1Q8K0T0 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Rtn1Q8K0T0 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtn1Q8K0T0 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Rtn1Q8K0T0 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rtn1Q8K0T0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rtn1Q8K0T0 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rtn1Q8K0T0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtn1Q8K0T0 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtn1Q8K0T0 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtn1Q8K0T0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtn1Q8K0T0 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtn1Q8K0T0 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Rtn1Q8K0T0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtn1Q8K0T0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtn1Q8K0T0 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.45■□□□□ 0.38
Rtn1Q8K0T0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.45■□□□□ 0.38
Rtn1Q8K0T0 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rtn1Q8K0T0 Gm5364-201ENSMUST00000216789 889 ntBASIC17.45■□□□□ 0.38
Rtn1Q8K0T0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtn1Q8K0T0 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rtn1Q8K0T0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtn1Q8K0T0 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtn1Q8K0T0 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rtn1Q8K0T0 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rtn1Q8K0T0 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtn1Q8K0T0 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtn1Q8K0T0 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Rtn1Q8K0T0 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Rtn1Q8K0T0 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtn1Q8K0T0 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtn1Q8K0T0 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtn1Q8K0T0 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtn1Q8K0T0 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
Rtn1Q8K0T0 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Rtn1Q8K0T0 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rtn1Q8K0T0 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtn1Q8K0T0 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Rtn1Q8K0T0 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtn1Q8K0T0 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtn1Q8K0T0 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtn1Q8K0T0 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtn1Q8K0T0 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rtn1Q8K0T0 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtn1Q8K0T0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.44■□□□□ 0.38
Rtn1Q8K0T0 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Rtn1Q8K0T0 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Rtn1Q8K0T0 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.44■□□□□ 0.38
Rtn1Q8K0T0 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.44■□□□□ 0.38
Rtn1Q8K0T0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.44■□□□□ 0.38
Rtn1Q8K0T0 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtn1Q8K0T0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rtn1Q8K0T0 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtn1Q8K0T0 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.44■□□□□ 0.38
Rtn1Q8K0T0 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtn1Q8K0T0 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtn1Q8K0T0 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtn1Q8K0T0 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtn1Q8K0T0 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rtn1Q8K0T0 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtn1Q8K0T0 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtn1Q8K0T0 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rtn1Q8K0T0 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtn1Q8K0T0 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rtn1Q8K0T0 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtn1Q8K0T0 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtn1Q8K0T0 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtn1Q8K0T0 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Rtn1Q8K0T0 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtn1Q8K0T0 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms