Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgcll1Q8JZS7 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Hmgcll1Q8JZS7 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgcll1Q8JZS7 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgcll1Q8JZS7 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgcll1Q8JZS7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgcll1Q8JZS7 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Hmgcll1Q8JZS7 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgcll1Q8JZS7 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgcll1Q8JZS7 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgcll1Q8JZS7 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgcll1Q8JZS7 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgcll1Q8JZS7 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgcll1Q8JZS7 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgcll1Q8JZS7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Hmgcll1Q8JZS7 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgcll1Q8JZS7 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgcll1Q8JZS7 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgcll1Q8JZS7 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.54■□□□□ 0.08
Hmgcll1Q8JZS7 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Hmgcll1Q8JZS7 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.54■□□□□ 0.08
Hmgcll1Q8JZS7 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgcll1Q8JZS7 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Hmgcll1Q8JZS7 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Hmgcll1Q8JZS7 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Hmgcll1Q8JZS7 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgcll1Q8JZS7 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgcll1Q8JZS7 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.54■□□□□ 0.08
Hmgcll1Q8JZS7 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Hmgcll1Q8JZS7 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.54■□□□□ 0.08
Hmgcll1Q8JZS7 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgcll1Q8JZS7 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgcll1Q8JZS7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgcll1Q8JZS7 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 Gm6973-201ENSMUST00000117080 721 ntBASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 BC037039-201ENSMUST00000192003 2205 ntBASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Hmgcll1Q8JZS7 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hmgcll1Q8JZS7 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
Hmgcll1Q8JZS7 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Hmgcll1Q8JZS7 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.52■□□□□ 0.08
Hmgcll1Q8JZS7 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Hmgcll1Q8JZS7 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Hmgcll1Q8JZS7 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.52■□□□□ 0.08
Hmgcll1Q8JZS7 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hmgcll1Q8JZS7 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Hmgcll1Q8JZS7 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hmgcll1Q8JZS7 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Hmgcll1Q8JZS7 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hmgcll1Q8JZS7 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.08
Hmgcll1Q8JZS7 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.52■□□□□ 0.08
Hmgcll1Q8JZS7 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.52■□□□□ 0.08
Hmgcll1Q8JZS7 Gm43474-201ENSMUST00000196415 774 ntBASIC15.52■□□□□ 0.08
Hmgcll1Q8JZS7 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.52■□□□□ 0.08
Hmgcll1Q8JZS7 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Hmgcll1Q8JZS7 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.52■□□□□ 0.08
Hmgcll1Q8JZS7 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hmgcll1Q8JZS7 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hmgcll1Q8JZS7 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hmgcll1Q8JZS7 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hmgcll1Q8JZS7 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hmgcll1Q8JZS7 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hmgcll1Q8JZS7 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Hmgcll1Q8JZS7 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hmgcll1Q8JZS7 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hmgcll1Q8JZS7 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hmgcll1Q8JZS7 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.07
Hmgcll1Q8JZS7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hmgcll1Q8JZS7 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hmgcll1Q8JZS7 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms