Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CroccQ8CJ40 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CroccQ8CJ40 Gm13597-201ENSMUST00000121239 375 ntBASIC14.48□□□□□ -0.09
CroccQ8CJ40 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CroccQ8CJ40 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CroccQ8CJ40 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CroccQ8CJ40 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CroccQ8CJ40 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CroccQ8CJ40 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CroccQ8CJ40 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CroccQ8CJ40 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CroccQ8CJ40 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CroccQ8CJ40 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CroccQ8CJ40 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.47□□□□□ -0.09
CroccQ8CJ40 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
CroccQ8CJ40 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CroccQ8CJ40 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CroccQ8CJ40 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.47□□□□□ -0.09
CroccQ8CJ40 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.47□□□□□ -0.09
CroccQ8CJ40 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CroccQ8CJ40 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CroccQ8CJ40 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CroccQ8CJ40 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CroccQ8CJ40 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.47□□□□□ -0.09
CroccQ8CJ40 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.47□□□□□ -0.09
CroccQ8CJ40 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CroccQ8CJ40 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CroccQ8CJ40 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.47□□□□□ -0.09
CroccQ8CJ40 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CroccQ8CJ40 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CroccQ8CJ40 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CroccQ8CJ40 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CroccQ8CJ40 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.46□□□□□ -0.09
CroccQ8CJ40 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CroccQ8CJ40 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
CroccQ8CJ40 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CroccQ8CJ40 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CroccQ8CJ40 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CroccQ8CJ40 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CroccQ8CJ40 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CroccQ8CJ40 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CroccQ8CJ40 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.46□□□□□ -0.09
CroccQ8CJ40 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CroccQ8CJ40 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CroccQ8CJ40 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CroccQ8CJ40 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CroccQ8CJ40 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.46□□□□□ -0.09
CroccQ8CJ40 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CroccQ8CJ40 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CroccQ8CJ40 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CroccQ8CJ40 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CroccQ8CJ40 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CroccQ8CJ40 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CroccQ8CJ40 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.46□□□□□ -0.09
CroccQ8CJ40 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CroccQ8CJ40 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.46□□□□□ -0.09
CroccQ8CJ40 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CroccQ8CJ40 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CroccQ8CJ40 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CroccQ8CJ40 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CroccQ8CJ40 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
CroccQ8CJ40 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CroccQ8CJ40 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
CroccQ8CJ40 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
CroccQ8CJ40 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CroccQ8CJ40 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CroccQ8CJ40 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CroccQ8CJ40 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CroccQ8CJ40 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CroccQ8CJ40 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CroccQ8CJ40 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CroccQ8CJ40 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CroccQ8CJ40 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CroccQ8CJ40 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CroccQ8CJ40 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CroccQ8CJ40 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CroccQ8CJ40 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CroccQ8CJ40 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CroccQ8CJ40 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CroccQ8CJ40 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CroccQ8CJ40 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CroccQ8CJ40 Gm7862-201ENSMUST00000121461 292 ntBASIC14.45□□□□□ -0.1
CroccQ8CJ40 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.45□□□□□ -0.1
CroccQ8CJ40 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CroccQ8CJ40 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.45□□□□□ -0.1
CroccQ8CJ40 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CroccQ8CJ40 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CroccQ8CJ40 Gm27300-201ENSMUST00000184085 97 ntBASIC14.45□□□□□ -0.1
CroccQ8CJ40 Gm27335-201ENSMUST00000184758 97 ntBASIC14.45□□□□□ -0.1
CroccQ8CJ40 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.45□□□□□ -0.1
CroccQ8CJ40 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.45□□□□□ -0.1
CroccQ8CJ40 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CroccQ8CJ40 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CroccQ8CJ40 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CroccQ8CJ40 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CroccQ8CJ40 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.45□□□□□ -0.1
CroccQ8CJ40 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CroccQ8CJ40 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
CroccQ8CJ40 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CroccQ8CJ40 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms