Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Clip4Q8CI96 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clip4Q8CI96 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clip4Q8CI96 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clip4Q8CI96 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.28■□□□□ 0.04
Clip4Q8CI96 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clip4Q8CI96 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clip4Q8CI96 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Clip4Q8CI96 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Clip4Q8CI96 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Clip4Q8CI96 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Clip4Q8CI96 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.28■□□□□ 0.04
Clip4Q8CI96 Gm18622-201ENSMUST00000219361 595 ntBASIC15.28■□□□□ 0.04
Clip4Q8CI96 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Clip4Q8CI96 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clip4Q8CI96 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clip4Q8CI96 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Clip4Q8CI96 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Clip4Q8CI96 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clip4Q8CI96 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Clip4Q8CI96 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Clip4Q8CI96 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clip4Q8CI96 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Clip4Q8CI96 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Clip4Q8CI96 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Clip4Q8CI96 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clip4Q8CI96 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.28■□□□□ 0.04
Clip4Q8CI96 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clip4Q8CI96 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clip4Q8CI96 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clip4Q8CI96 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Clip4Q8CI96 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clip4Q8CI96 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clip4Q8CI96 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Clip4Q8CI96 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Clip4Q8CI96 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Clip4Q8CI96 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Clip4Q8CI96 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clip4Q8CI96 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clip4Q8CI96 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clip4Q8CI96 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clip4Q8CI96 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.27■□□□□ 0.04
Clip4Q8CI96 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clip4Q8CI96 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clip4Q8CI96 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clip4Q8CI96 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clip4Q8CI96 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clip4Q8CI96 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Clip4Q8CI96 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.27■□□□□ 0.04
Clip4Q8CI96 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Clip4Q8CI96 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Clip4Q8CI96 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.27■□□□□ 0.04
Clip4Q8CI96 Efs-202ENSMUST00000227037 2540 ntBASIC15.27■□□□□ 0.03
Clip4Q8CI96 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clip4Q8CI96 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clip4Q8CI96 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Clip4Q8CI96 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.27■□□□□ 0.03
Clip4Q8CI96 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clip4Q8CI96 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clip4Q8CI96 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Clip4Q8CI96 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clip4Q8CI96 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Clip4Q8CI96 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.26■□□□□ 0.03
Clip4Q8CI96 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Clip4Q8CI96 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Clip4Q8CI96 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Clip4Q8CI96 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clip4Q8CI96 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clip4Q8CI96 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clip4Q8CI96 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clip4Q8CI96 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clip4Q8CI96 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clip4Q8CI96 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.26■□□□□ 0.03
Clip4Q8CI96 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.26■□□□□ 0.03
Clip4Q8CI96 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clip4Q8CI96 Gm6257-201ENSMUST00000163864 910 ntBASIC15.26■□□□□ 0.03
Clip4Q8CI96 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clip4Q8CI96 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clip4Q8CI96 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.26■□□□□ 0.03
Clip4Q8CI96 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.26■□□□□ 0.03
Clip4Q8CI96 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Clip4Q8CI96 Gm6089-201ENSMUST00000197666 938 ntBASIC15.26■□□□□ 0.03
Clip4Q8CI96 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Clip4Q8CI96 Gm2651-201ENSMUST00000203560 838 ntBASIC15.26■□□□□ 0.03
Clip4Q8CI96 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clip4Q8CI96 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms