Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Sox30Q8CGW4 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox30Q8CGW4 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.56■□□□□ 0.24
Sox30Q8CGW4 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sox30Q8CGW4 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Sox30Q8CGW4 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sox30Q8CGW4 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox30Q8CGW4 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox30Q8CGW4 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox30Q8CGW4 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox30Q8CGW4 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Sox30Q8CGW4 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox30Q8CGW4 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox30Q8CGW4 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Sox30Q8CGW4 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sox30Q8CGW4 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox30Q8CGW4 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox30Q8CGW4 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox30Q8CGW4 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox30Q8CGW4 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Sox30Q8CGW4 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox30Q8CGW4 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox30Q8CGW4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Sox30Q8CGW4 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox30Q8CGW4 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox30Q8CGW4 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Sox30Q8CGW4 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox30Q8CGW4 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox30Q8CGW4 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox30Q8CGW4 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox30Q8CGW4 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox30Q8CGW4 Gm12895-201ENSMUST00000122214 226 ntBASIC16.55■□□□□ 0.24
Sox30Q8CGW4 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.55■□□□□ 0.24
Sox30Q8CGW4 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sox30Q8CGW4 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.55■□□□□ 0.24
Sox30Q8CGW4 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox30Q8CGW4 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Sox30Q8CGW4 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox30Q8CGW4 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox30Q8CGW4 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox30Q8CGW4 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox30Q8CGW4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox30Q8CGW4 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Sox30Q8CGW4 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.55■□□□□ 0.24
Sox30Q8CGW4 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Sox30Q8CGW4 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Sox30Q8CGW4 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox30Q8CGW4 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.54■□□□□ 0.24
Sox30Q8CGW4 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sox30Q8CGW4 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.54■□□□□ 0.24
Sox30Q8CGW4 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Sox30Q8CGW4 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox30Q8CGW4 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox30Q8CGW4 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox30Q8CGW4 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sox30Q8CGW4 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox30Q8CGW4 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sox30Q8CGW4 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sox30Q8CGW4 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox30Q8CGW4 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox30Q8CGW4 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox30Q8CGW4 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.54■□□□□ 0.24
Sox30Q8CGW4 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sox30Q8CGW4 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sox30Q8CGW4 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Sox30Q8CGW4 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Sox30Q8CGW4 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Sox30Q8CGW4 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox30Q8CGW4 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox30Q8CGW4 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.53■□□□□ 0.24
Sox30Q8CGW4 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.53■□□□□ 0.24
Sox30Q8CGW4 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox30Q8CGW4 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox30Q8CGW4 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox30Q8CGW4 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.53■□□□□ 0.24
Sox30Q8CGW4 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sox30Q8CGW4 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox30Q8CGW4 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox30Q8CGW4 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox30Q8CGW4 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sox30Q8CGW4 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox30Q8CGW4 Gm18489-201ENSMUST00000172565 551 ntBASIC16.53■□□□□ 0.24
Sox30Q8CGW4 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sox30Q8CGW4 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.53■□□□□ 0.24
Sox30Q8CGW4 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox30Q8CGW4 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox30Q8CGW4 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sox30Q8CGW4 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Sox30Q8CGW4 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox30Q8CGW4 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.53■□□□□ 0.24
Sox30Q8CGW4 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Sox30Q8CGW4 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox30Q8CGW4 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox30Q8CGW4 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox30Q8CGW4 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox30Q8CGW4 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox30Q8CGW4 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox30Q8CGW4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox30Q8CGW4 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox30Q8CGW4 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms