Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc5Q8CG46 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc5Q8CG46 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Smc5Q8CG46 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc5Q8CG46 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC18.74■□□□□ 0.59
Smc5Q8CG46 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smc5Q8CG46 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smc5Q8CG46 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc5Q8CG46 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Smc5Q8CG46 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc5Q8CG46 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Smc5Q8CG46 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smc5Q8CG46 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.74■□□□□ 0.59
Smc5Q8CG46 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc5Q8CG46 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc5Q8CG46 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc5Q8CG46 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smc5Q8CG46 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Smc5Q8CG46 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Smc5Q8CG46 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc5Q8CG46 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Smc5Q8CG46 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC18.73■□□□□ 0.59
Smc5Q8CG46 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.73■□□□□ 0.59
Smc5Q8CG46 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc5Q8CG46 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Smc5Q8CG46 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.73■□□□□ 0.59
Smc5Q8CG46 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Smc5Q8CG46 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smc5Q8CG46 Gm43767-201ENSMUST00000198933 381 ntBASIC18.73■□□□□ 0.59
Smc5Q8CG46 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smc5Q8CG46 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc5Q8CG46 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC18.73■□□□□ 0.59
Smc5Q8CG46 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc5Q8CG46 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc5Q8CG46 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc5Q8CG46 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18.73■□□□□ 0.59
Smc5Q8CG46 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smc5Q8CG46 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Smc5Q8CG46 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc5Q8CG46 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc5Q8CG46 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smc5Q8CG46 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc5Q8CG46 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc5Q8CG46 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smc5Q8CG46 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.72■□□□□ 0.59
Smc5Q8CG46 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc5Q8CG46 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc5Q8CG46 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC18.72■□□□□ 0.59
Smc5Q8CG46 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc5Q8CG46 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc5Q8CG46 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.72■□□□□ 0.59
Smc5Q8CG46 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Smc5Q8CG46 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc5Q8CG46 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc5Q8CG46 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smc5Q8CG46 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.72■□□□□ 0.59
Smc5Q8CG46 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smc5Q8CG46 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc5Q8CG46 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc5Q8CG46 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smc5Q8CG46 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc5Q8CG46 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.72■□□□□ 0.59
Smc5Q8CG46 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc5Q8CG46 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc5Q8CG46 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc5Q8CG46 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc5Q8CG46 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Smc5Q8CG46 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc5Q8CG46 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc5Q8CG46 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc5Q8CG46 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Smc5Q8CG46 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc5Q8CG46 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Smc5Q8CG46 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc5Q8CG46 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc5Q8CG46 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC18.71■□□□□ 0.59
Smc5Q8CG46 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC18.71■□□□□ 0.59
Smc5Q8CG46 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc5Q8CG46 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smc5Q8CG46 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.71■□□□□ 0.59
Smc5Q8CG46 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc5Q8CG46 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc5Q8CG46 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc5Q8CG46 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc5Q8CG46 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Smc5Q8CG46 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Smc5Q8CG46 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Smc5Q8CG46 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Smc5Q8CG46 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Smc5Q8CG46 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc5Q8CG46 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc5Q8CG46 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc5Q8CG46 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc5Q8CG46 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc5Q8CG46 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Smc5Q8CG46 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smc5Q8CG46 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.7■□□□□ 0.58
Smc5Q8CG46 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.7■□□□□ 0.58
Smc5Q8CG46 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.7■□□□□ 0.58
Smc5Q8CG46 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms