Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc38Q8CDN8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Ccdc38Q8CDN8 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc38Q8CDN8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc38Q8CDN8 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc38Q8CDN8 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.85■□□□□ 0.29
Ccdc38Q8CDN8 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc38Q8CDN8 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc38Q8CDN8 Celf4-206ENSMUST00000224553 1729 ntBASIC16.84■□□□□ 0.29
Ccdc38Q8CDN8 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.84■□□□□ 0.29
Ccdc38Q8CDN8 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ccdc38Q8CDN8 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc38Q8CDN8 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc38Q8CDN8 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc38Q8CDN8 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc38Q8CDN8 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc38Q8CDN8 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc38Q8CDN8 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc38Q8CDN8 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ccdc38Q8CDN8 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ccdc38Q8CDN8 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc38Q8CDN8 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Ccdc38Q8CDN8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.84■□□□□ 0.29
Ccdc38Q8CDN8 Gm13418-201ENSMUST00000119097 944 ntBASIC16.84■□□□□ 0.29
Ccdc38Q8CDN8 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc38Q8CDN8 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc38Q8CDN8 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.84■□□□□ 0.29
Ccdc38Q8CDN8 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc38Q8CDN8 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc38Q8CDN8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc38Q8CDN8 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc38Q8CDN8 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc38Q8CDN8 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ccdc38Q8CDN8 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc38Q8CDN8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc38Q8CDN8 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc38Q8CDN8 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc38Q8CDN8 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.84■□□□□ 0.29
Ccdc38Q8CDN8 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc38Q8CDN8 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc38Q8CDN8 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc38Q8CDN8 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc38Q8CDN8 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc38Q8CDN8 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc38Q8CDN8 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc38Q8CDN8 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc38Q8CDN8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc38Q8CDN8 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.83■□□□□ 0.28
Ccdc38Q8CDN8 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc38Q8CDN8 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc38Q8CDN8 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc38Q8CDN8 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.83■□□□□ 0.28
Ccdc38Q8CDN8 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.83■□□□□ 0.28
Ccdc38Q8CDN8 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.83■□□□□ 0.28
Ccdc38Q8CDN8 Efs-202ENSMUST00000227037 2540 ntBASIC16.83■□□□□ 0.28
Ccdc38Q8CDN8 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc38Q8CDN8 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc38Q8CDN8 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Ccdc38Q8CDN8 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc38Q8CDN8 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc38Q8CDN8 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Ccdc38Q8CDN8 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc38Q8CDN8 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc38Q8CDN8 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc38Q8CDN8 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc38Q8CDN8 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.83■□□□□ 0.28
Ccdc38Q8CDN8 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc38Q8CDN8 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Ccdc38Q8CDN8 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc38Q8CDN8 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc38Q8CDN8 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc38Q8CDN8 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc38Q8CDN8 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc38Q8CDN8 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.82■□□□□ 0.28
Ccdc38Q8CDN8 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc38Q8CDN8 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc38Q8CDN8 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.82■□□□□ 0.28
Ccdc38Q8CDN8 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Ccdc38Q8CDN8 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.82■□□□□ 0.28
Ccdc38Q8CDN8 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.82■□□□□ 0.28
Ccdc38Q8CDN8 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc38Q8CDN8 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc38Q8CDN8 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc38Q8CDN8 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc38Q8CDN8 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
Ccdc38Q8CDN8 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc38Q8CDN8 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc38Q8CDN8 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc38Q8CDN8 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc38Q8CDN8 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc38Q8CDN8 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ccdc38Q8CDN8 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc38Q8CDN8 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc38Q8CDN8 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc38Q8CDN8 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ccdc38Q8CDN8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc38Q8CDN8 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc38Q8CDN8 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.82■□□□□ 0.28
Ccdc38Q8CDN8 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc38Q8CDN8 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms