Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.28■□□□□ 0.2
Vcpip1Q8CDG3 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.28■□□□□ 0.2
Vcpip1Q8CDG3 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.28■□□□□ 0.2
Vcpip1Q8CDG3 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.28■□□□□ 0.2
Vcpip1Q8CDG3 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vcpip1Q8CDG3 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vcpip1Q8CDG3 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vcpip1Q8CDG3 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vcpip1Q8CDG3 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vcpip1Q8CDG3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Vcpip1Q8CDG3 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vcpip1Q8CDG3 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vcpip1Q8CDG3 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vcpip1Q8CDG3 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vcpip1Q8CDG3 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Vcpip1Q8CDG3 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Vcpip1Q8CDG3 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vcpip1Q8CDG3 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vcpip1Q8CDG3 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vcpip1Q8CDG3 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Vcpip1Q8CDG3 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vcpip1Q8CDG3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Vcpip1Q8CDG3 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vcpip1Q8CDG3 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.27■□□□□ 0.2
Vcpip1Q8CDG3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.27■□□□□ 0.2
Vcpip1Q8CDG3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Vcpip1Q8CDG3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vcpip1Q8CDG3 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.27■□□□□ 0.2
Vcpip1Q8CDG3 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.27■□□□□ 0.2
Vcpip1Q8CDG3 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.27■□□□□ 0.2
Vcpip1Q8CDG3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.27■□□□□ 0.2
Vcpip1Q8CDG3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vcpip1Q8CDG3 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.27■□□□□ 0.2
Vcpip1Q8CDG3 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vcpip1Q8CDG3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vcpip1Q8CDG3 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.27■□□□□ 0.2
Vcpip1Q8CDG3 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vcpip1Q8CDG3 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vcpip1Q8CDG3 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vcpip1Q8CDG3 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vcpip1Q8CDG3 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vcpip1Q8CDG3 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
Vcpip1Q8CDG3 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Vcpip1Q8CDG3 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vcpip1Q8CDG3 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vcpip1Q8CDG3 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vcpip1Q8CDG3 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vcpip1Q8CDG3 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vcpip1Q8CDG3 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vcpip1Q8CDG3 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Vcpip1Q8CDG3 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vcpip1Q8CDG3 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vcpip1Q8CDG3 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Vcpip1Q8CDG3 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vcpip1Q8CDG3 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vcpip1Q8CDG3 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vcpip1Q8CDG3 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vcpip1Q8CDG3 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Vcpip1Q8CDG3 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vcpip1Q8CDG3 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.26■□□□□ 0.19
Vcpip1Q8CDG3 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.26■□□□□ 0.19
Vcpip1Q8CDG3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Vcpip1Q8CDG3 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vcpip1Q8CDG3 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vcpip1Q8CDG3 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vcpip1Q8CDG3 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vcpip1Q8CDG3 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vcpip1Q8CDG3 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vcpip1Q8CDG3 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vcpip1Q8CDG3 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vcpip1Q8CDG3 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vcpip1Q8CDG3 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vcpip1Q8CDG3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vcpip1Q8CDG3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vcpip1Q8CDG3 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vcpip1Q8CDG3 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vcpip1Q8CDG3 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.25■□□□□ 0.19
Vcpip1Q8CDG3 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vcpip1Q8CDG3 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vcpip1Q8CDG3 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vcpip1Q8CDG3 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.25■□□□□ 0.19
Vcpip1Q8CDG3 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.25■□□□□ 0.19
Vcpip1Q8CDG3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vcpip1Q8CDG3 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vcpip1Q8CDG3 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Vcpip1Q8CDG3 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vcpip1Q8CDG3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vcpip1Q8CDG3 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.25■□□□□ 0.19
Vcpip1Q8CDG3 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.25■□□□□ 0.19
Vcpip1Q8CDG3 Gm11452-201ENSMUST00000122376 690 ntBASIC16.25■□□□□ 0.19
Vcpip1Q8CDG3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vcpip1Q8CDG3 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vcpip1Q8CDG3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Vcpip1Q8CDG3 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Vcpip1Q8CDG3 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vcpip1Q8CDG3 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vcpip1Q8CDG3 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vcpip1Q8CDG3 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vcpip1Q8CDG3 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vcpip1Q8CDG3 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms