Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.63■□□□□ 0.41
Alx1Q8C8B0 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.63■□□□□ 0.41
Alx1Q8C8B0 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.63■□□□□ 0.41
Alx1Q8C8B0 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.63■□□□□ 0.41
Alx1Q8C8B0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Alx1Q8C8B0 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Alx1Q8C8B0 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Alx1Q8C8B0 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Alx1Q8C8B0 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Alx1Q8C8B0 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Alx1Q8C8B0 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Alx1Q8C8B0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Alx1Q8C8B0 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Alx1Q8C8B0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Alx1Q8C8B0 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Alx1Q8C8B0 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Alx1Q8C8B0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Alx1Q8C8B0 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Alx1Q8C8B0 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Alx1Q8C8B0 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Alx1Q8C8B0 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Alx1Q8C8B0 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.62■□□□□ 0.41
Alx1Q8C8B0 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Alx1Q8C8B0 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Alx1Q8C8B0 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Alx1Q8C8B0 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Alx1Q8C8B0 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.62■□□□□ 0.41
Alx1Q8C8B0 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.62■□□□□ 0.41
Alx1Q8C8B0 Gm11025-201ENSMUST00000140773 466 ntBASIC17.62■□□□□ 0.41
Alx1Q8C8B0 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.62■□□□□ 0.41
Alx1Q8C8B0 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.62■□□□□ 0.41
Alx1Q8C8B0 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Alx1Q8C8B0 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Alx1Q8C8B0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Alx1Q8C8B0 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.62■□□□□ 0.41
Alx1Q8C8B0 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Alx1Q8C8B0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.62■□□□□ 0.41
Alx1Q8C8B0 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Alx1Q8C8B0 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Alx1Q8C8B0 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Alx1Q8C8B0 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.62■□□□□ 0.41
Alx1Q8C8B0 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Alx1Q8C8B0 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Alx1Q8C8B0 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Alx1Q8C8B0 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Alx1Q8C8B0 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Alx1Q8C8B0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Alx1Q8C8B0 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Alx1Q8C8B0 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.61■□□□□ 0.41
Alx1Q8C8B0 Gm27397-201ENSMUST00000184997 107 ntBASIC17.61■□□□□ 0.41
Alx1Q8C8B0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Alx1Q8C8B0 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.61■□□□□ 0.41
Alx1Q8C8B0 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Alx1Q8C8B0 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Alx1Q8C8B0 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Alx1Q8C8B0 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.61■□□□□ 0.41
Alx1Q8C8B0 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Alx1Q8C8B0 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Alx1Q8C8B0 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Alx1Q8C8B0 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Alx1Q8C8B0 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Alx1Q8C8B0 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Alx1Q8C8B0 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Alx1Q8C8B0 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Alx1Q8C8B0 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.61■□□□□ 0.41
Alx1Q8C8B0 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Alx1Q8C8B0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Alx1Q8C8B0 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Alx1Q8C8B0 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Alx1Q8C8B0 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.61■□□□□ 0.41
Alx1Q8C8B0 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Alx1Q8C8B0 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Alx1Q8C8B0 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Alx1Q8C8B0 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Alx1Q8C8B0 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Alx1Q8C8B0 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Alx1Q8C8B0 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Alx1Q8C8B0 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.6■□□□□ 0.41
Alx1Q8C8B0 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.6■□□□□ 0.41
Alx1Q8C8B0 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Alx1Q8C8B0 Gm2213-201ENSMUST00000197485 688 ntBASIC17.6■□□□□ 0.41
Alx1Q8C8B0 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.6■□□□□ 0.41
Alx1Q8C8B0 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Alx1Q8C8B0 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Alx1Q8C8B0 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Alx1Q8C8B0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Alx1Q8C8B0 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Alx1Q8C8B0 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Alx1Q8C8B0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Alx1Q8C8B0 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Alx1Q8C8B0 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.6■□□□□ 0.41
Alx1Q8C8B0 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Alx1Q8C8B0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Alx1Q8C8B0 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Alx1Q8C8B0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Alx1Q8C8B0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Alx1Q8C8B0 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Alx1Q8C8B0 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Alx1Q8C8B0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Alx1Q8C8B0 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms