Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC19.32■□□□□ 0.68
Ccdc60Q8C4J0 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc60Q8C4J0 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc60Q8C4J0 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Ccdc60Q8C4J0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc60Q8C4J0 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc60Q8C4J0 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc60Q8C4J0 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc60Q8C4J0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Ccdc60Q8C4J0 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc60Q8C4J0 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc60Q8C4J0 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc60Q8C4J0 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc60Q8C4J0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc60Q8C4J0 AC025913.2-201ENSMUST00000220136 1766 ntBASIC19.31■□□□□ 0.68
Ccdc60Q8C4J0 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc60Q8C4J0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC19.31■□□□□ 0.68
Ccdc60Q8C4J0 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc60Q8C4J0 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc60Q8C4J0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc60Q8C4J0 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc60Q8C4J0 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc60Q8C4J0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc60Q8C4J0 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc60Q8C4J0 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc60Q8C4J0 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc60Q8C4J0 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc60Q8C4J0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc60Q8C4J0 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC19.3■□□□□ 0.68
Ccdc60Q8C4J0 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Ccdc60Q8C4J0 Gm12260-201ENSMUST00000122447 411 ntBASIC19.3■□□□□ 0.68
Ccdc60Q8C4J0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Ccdc60Q8C4J0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
Ccdc60Q8C4J0 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc60Q8C4J0 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ccdc60Q8C4J0 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc60Q8C4J0 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC19.3■□□□□ 0.68
Ccdc60Q8C4J0 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc60Q8C4J0 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc60Q8C4J0 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc60Q8C4J0 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc60Q8C4J0 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc60Q8C4J0 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc60Q8C4J0 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc60Q8C4J0 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc60Q8C4J0 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc60Q8C4J0 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc60Q8C4J0 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc60Q8C4J0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc60Q8C4J0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc60Q8C4J0 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Ccdc60Q8C4J0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC19.29■□□□□ 0.68
Ccdc60Q8C4J0 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC19.29■□□□□ 0.68
Ccdc60Q8C4J0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc60Q8C4J0 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC19.29■□□□□ 0.68
Ccdc60Q8C4J0 Gm7229-201ENSMUST00000214719 1007 ntBASIC19.29■□□□□ 0.68
Ccdc60Q8C4J0 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ccdc60Q8C4J0 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
Ccdc60Q8C4J0 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc60Q8C4J0 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc60Q8C4J0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC19.29■□□□□ 0.68
Ccdc60Q8C4J0 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ccdc60Q8C4J0 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc60Q8C4J0 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Ccdc60Q8C4J0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc60Q8C4J0 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ccdc60Q8C4J0 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc60Q8C4J0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc60Q8C4J0 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc60Q8C4J0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc60Q8C4J0 Gm11779-201ENSMUST00000118541 368 ntBASIC19.28■□□□□ 0.68
Ccdc60Q8C4J0 Gm43514-201ENSMUST00000198852 424 ntBASIC19.28■□□□□ 0.68
Ccdc60Q8C4J0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc60Q8C4J0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc60Q8C4J0 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Ccdc60Q8C4J0 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC19.28■□□□□ 0.68
Ccdc60Q8C4J0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc60Q8C4J0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc60Q8C4J0 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc60Q8C4J0 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc60Q8C4J0 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc60Q8C4J0 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc60Q8C4J0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc60Q8C4J0 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC19.28■□□□□ 0.68
Ccdc60Q8C4J0 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ccdc60Q8C4J0 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc60Q8C4J0 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc60Q8C4J0 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc60Q8C4J0 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc60Q8C4J0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ccdc60Q8C4J0 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc60Q8C4J0 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ccdc60Q8C4J0 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc60Q8C4J0 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc60Q8C4J0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ccdc60Q8C4J0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Ccdc60Q8C4J0 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc60Q8C4J0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc60Q8C4J0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC19.27■□□□□ 0.68
Ccdc60Q8C4J0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms