Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.69■□□□□ 0.42
Usp44Q8C2S0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp44Q8C2S0 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp44Q8C2S0 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp44Q8C2S0 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp44Q8C2S0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp44Q8C2S0 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.69■□□□□ 0.42
Usp44Q8C2S0 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp44Q8C2S0 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp44Q8C2S0 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.69■□□□□ 0.42
Usp44Q8C2S0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp44Q8C2S0 Gm11779-201ENSMUST00000118541 368 ntBASIC17.69■□□□□ 0.42
Usp44Q8C2S0 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Usp44Q8C2S0 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.69■□□□□ 0.42
Usp44Q8C2S0 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.69■□□□□ 0.42
Usp44Q8C2S0 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp44Q8C2S0 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp44Q8C2S0 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp44Q8C2S0 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp44Q8C2S0 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp44Q8C2S0 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp44Q8C2S0 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp44Q8C2S0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp44Q8C2S0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Usp44Q8C2S0 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp44Q8C2S0 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp44Q8C2S0 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp44Q8C2S0 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.68■□□□□ 0.42
Usp44Q8C2S0 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Usp44Q8C2S0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp44Q8C2S0 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp44Q8C2S0 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
Usp44Q8C2S0 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Usp44Q8C2S0 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp44Q8C2S0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp44Q8C2S0 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.68■□□□□ 0.42
Usp44Q8C2S0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.68■□□□□ 0.42
Usp44Q8C2S0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
Usp44Q8C2S0 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.68■□□□□ 0.42
Usp44Q8C2S0 Gm6443-201ENSMUST00000203599 874 ntBASIC17.68■□□□□ 0.42
Usp44Q8C2S0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.68■□□□□ 0.42
Usp44Q8C2S0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Usp44Q8C2S0 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp44Q8C2S0 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp44Q8C2S0 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp44Q8C2S0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp44Q8C2S0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Usp44Q8C2S0 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp44Q8C2S0 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp44Q8C2S0 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp44Q8C2S0 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp44Q8C2S0 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp44Q8C2S0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.67■□□□□ 0.42
Usp44Q8C2S0 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Usp44Q8C2S0 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp44Q8C2S0 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.67■□□□□ 0.42
Usp44Q8C2S0 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp44Q8C2S0 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.67■□□□□ 0.42
Usp44Q8C2S0 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp44Q8C2S0 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.67■□□□□ 0.42
Usp44Q8C2S0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp44Q8C2S0 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp44Q8C2S0 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp44Q8C2S0 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp44Q8C2S0 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp44Q8C2S0 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.67■□□□□ 0.42
Usp44Q8C2S0 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp44Q8C2S0 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Usp44Q8C2S0 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp44Q8C2S0 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp44Q8C2S0 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp44Q8C2S0 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp44Q8C2S0 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.66■□□□□ 0.42
Usp44Q8C2S0 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp44Q8C2S0 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Usp44Q8C2S0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp44Q8C2S0 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp44Q8C2S0 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp44Q8C2S0 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.66■□□□□ 0.42
Usp44Q8C2S0 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp44Q8C2S0 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.66■□□□□ 0.42
Usp44Q8C2S0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Usp44Q8C2S0 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.66■□□□□ 0.42
Usp44Q8C2S0 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
Usp44Q8C2S0 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp44Q8C2S0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp44Q8C2S0 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp44Q8C2S0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp44Q8C2S0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Usp44Q8C2S0 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp44Q8C2S0 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Usp44Q8C2S0 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp44Q8C2S0 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp44Q8C2S0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp44Q8C2S0 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Usp44Q8C2S0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp44Q8C2S0 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp44Q8C2S0 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp44Q8C2S0 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Usp44Q8C2S0 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms