Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tsen54Q8C2A2 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Tsen54Q8C2A2 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tsen54Q8C2A2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tsen54Q8C2A2 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tsen54Q8C2A2 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tsen54Q8C2A2 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tsen54Q8C2A2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Tsen54Q8C2A2 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
Tsen54Q8C2A2 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tsen54Q8C2A2 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tsen54Q8C2A2 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tsen54Q8C2A2 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Tsen54Q8C2A2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
Tsen54Q8C2A2 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tsen54Q8C2A2 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tsen54Q8C2A2 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tsen54Q8C2A2 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tsen54Q8C2A2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tsen54Q8C2A2 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tsen54Q8C2A2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tsen54Q8C2A2 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tsen54Q8C2A2 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tsen54Q8C2A2 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tsen54Q8C2A2 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tsen54Q8C2A2 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.69□□□□□ -0.38
Tsen54Q8C2A2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.69□□□□□ -0.38
Tsen54Q8C2A2 Gm6345-202ENSMUST00000180900 204 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms