Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Gm27357-201ENSMUST00000183754 135 ntBASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smim4Q8C1Q6 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smim4Q8C1Q6 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smim4Q8C1Q6 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smim4Q8C1Q6 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smim4Q8C1Q6 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smim4Q8C1Q6 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Smim4Q8C1Q6 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smim4Q8C1Q6 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.69□□□□□ -0.38
Smim4Q8C1Q6 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smim4Q8C1Q6 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smim4Q8C1Q6 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Smim4Q8C1Q6 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.69□□□□□ -0.38
Smim4Q8C1Q6 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smim4Q8C1Q6 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.69□□□□□ -0.38
Smim4Q8C1Q6 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.69□□□□□ -0.38
Smim4Q8C1Q6 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smim4Q8C1Q6 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.69□□□□□ -0.38
Smim4Q8C1Q6 AC154471.1-201ENSMUST00000224418 436 ntBASIC12.69□□□□□ -0.38
Smim4Q8C1Q6 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smim4Q8C1Q6 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smim4Q8C1Q6 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smim4Q8C1Q6 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smim4Q8C1Q6 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smim4Q8C1Q6 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smim4Q8C1Q6 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.69□□□□□ -0.38
Smim4Q8C1Q6 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smim4Q8C1Q6 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smim4Q8C1Q6 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smim4Q8C1Q6 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Smim4Q8C1Q6 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smim4Q8C1Q6 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smim4Q8C1Q6 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Gm12895-201ENSMUST00000122214 226 ntBASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smim4Q8C1Q6 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms