Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.79■□□□□ 0.12
Sh3rf3Q8C120 Gm37153-201ENSMUST00000193637 231 ntBASIC15.79■□□□□ 0.12
Sh3rf3Q8C120 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.79■□□□□ 0.12
Sh3rf3Q8C120 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3rf3Q8C120 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.79■□□□□ 0.12
Sh3rf3Q8C120 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3rf3Q8C120 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Sh3rf3Q8C120 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3rf3Q8C120 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3rf3Q8C120 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3rf3Q8C120 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3rf3Q8C120 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3rf3Q8C120 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Sh3rf3Q8C120 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Sh3rf3Q8C120 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf3Q8C120 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf3Q8C120 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf3Q8C120 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf3Q8C120 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf3Q8C120 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf3Q8C120 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf3Q8C120 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf3Q8C120 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf3Q8C120 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf3Q8C120 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Sh3rf3Q8C120 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf3Q8C120 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf3Q8C120 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Sh3rf3Q8C120 Mir5131-201ENSMUST00000175426 93 ntBASIC15.78■□□□□ 0.12
Sh3rf3Q8C120 Gm9682-201ENSMUST00000197505 556 ntBASIC15.78■□□□□ 0.12
Sh3rf3Q8C120 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Sh3rf3Q8C120 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf3Q8C120 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.78■□□□□ 0.12
Sh3rf3Q8C120 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf3Q8C120 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Sh3rf3Q8C120 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf3Q8C120 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Sh3rf3Q8C120 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf3Q8C120 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf3Q8C120 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf3Q8C120 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf3Q8C120 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf3Q8C120 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.78■□□□□ 0.12
Sh3rf3Q8C120 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf3Q8C120 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.77■□□□□ 0.12
Sh3rf3Q8C120 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3rf3Q8C120 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3rf3Q8C120 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3rf3Q8C120 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3rf3Q8C120 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.77■□□□□ 0.12
Sh3rf3Q8C120 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Sh3rf3Q8C120 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3rf3Q8C120 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3rf3Q8C120 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3rf3Q8C120 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3rf3Q8C120 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3rf3Q8C120 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3rf3Q8C120 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3rf3Q8C120 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.77■□□□□ 0.12
Sh3rf3Q8C120 Gm45167-201ENSMUST00000208007 322 ntBASIC15.77■□□□□ 0.12
Sh3rf3Q8C120 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.77■□□□□ 0.12
Sh3rf3Q8C120 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sh3rf3Q8C120 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sh3rf3Q8C120 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sh3rf3Q8C120 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sh3rf3Q8C120 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Sh3rf3Q8C120 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sh3rf3Q8C120 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sh3rf3Q8C120 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sh3rf3Q8C120 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sh3rf3Q8C120 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sh3rf3Q8C120 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sh3rf3Q8C120 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sh3rf3Q8C120 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sh3rf3Q8C120 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sh3rf3Q8C120 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3rf3Q8C120 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.76■□□□□ 0.11
Sh3rf3Q8C120 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3rf3Q8C120 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3rf3Q8C120 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3rf3Q8C120 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3rf3Q8C120 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3rf3Q8C120 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3rf3Q8C120 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3rf3Q8C120 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.76■□□□□ 0.11
Sh3rf3Q8C120 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3rf3Q8C120 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.76■□□□□ 0.11
Sh3rf3Q8C120 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.76■□□□□ 0.11
Sh3rf3Q8C120 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3rf3Q8C120 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.76■□□□□ 0.11
Sh3rf3Q8C120 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.76■□□□□ 0.11
Sh3rf3Q8C120 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.76■□□□□ 0.11
Sh3rf3Q8C120 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3rf3Q8C120 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3rf3Q8C120 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3rf3Q8C120 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3rf3Q8C120 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.76■□□□□ 0.11
Sh3rf3Q8C120 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3rf3Q8C120 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.76■□□□□ 0.11
Sh3rf3Q8C120 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms