Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nek11Q8C0Q4 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.94■□□□□ 0.46
Nek11Q8C0Q4 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nek11Q8C0Q4 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nek11Q8C0Q4 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nek11Q8C0Q4 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nek11Q8C0Q4 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nek11Q8C0Q4 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Nek11Q8C0Q4 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nek11Q8C0Q4 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.93■□□□□ 0.46
Nek11Q8C0Q4 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nek11Q8C0Q4 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Nek11Q8C0Q4 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
Nek11Q8C0Q4 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.93■□□□□ 0.46
Nek11Q8C0Q4 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nek11Q8C0Q4 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nek11Q8C0Q4 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Nek11Q8C0Q4 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nek11Q8C0Q4 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nek11Q8C0Q4 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.93■□□□□ 0.46
Nek11Q8C0Q4 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nek11Q8C0Q4 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nek11Q8C0Q4 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nek11Q8C0Q4 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nek11Q8C0Q4 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Nek11Q8C0Q4 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.93■□□□□ 0.46
Nek11Q8C0Q4 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nek11Q8C0Q4 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nek11Q8C0Q4 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.93■□□□□ 0.46
Nek11Q8C0Q4 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nek11Q8C0Q4 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Nek11Q8C0Q4 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nek11Q8C0Q4 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nek11Q8C0Q4 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Nek11Q8C0Q4 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Nek11Q8C0Q4 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nek11Q8C0Q4 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nek11Q8C0Q4 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nek11Q8C0Q4 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nek11Q8C0Q4 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nek11Q8C0Q4 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nek11Q8C0Q4 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Nek11Q8C0Q4 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nek11Q8C0Q4 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nek11Q8C0Q4 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nek11Q8C0Q4 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.92■□□□□ 0.46
Nek11Q8C0Q4 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nek11Q8C0Q4 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nek11Q8C0Q4 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
Nek11Q8C0Q4 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nek11Q8C0Q4 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nek11Q8C0Q4 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nek11Q8C0Q4 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Nek11Q8C0Q4 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nek11Q8C0Q4 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Nek11Q8C0Q4 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Nek11Q8C0Q4 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nek11Q8C0Q4 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nek11Q8C0Q4 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nek11Q8C0Q4 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Nek11Q8C0Q4 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nek11Q8C0Q4 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Nek11Q8C0Q4 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nek11Q8C0Q4 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nek11Q8C0Q4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nek11Q8C0Q4 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Nek11Q8C0Q4 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Nek11Q8C0Q4 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nek11Q8C0Q4 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nek11Q8C0Q4 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.91■□□□□ 0.46
Nek11Q8C0Q4 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nek11Q8C0Q4 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nek11Q8C0Q4 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nek11Q8C0Q4 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.91■□□□□ 0.46
Nek11Q8C0Q4 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nek11Q8C0Q4 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nek11Q8C0Q4 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nek11Q8C0Q4 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nek11Q8C0Q4 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nek11Q8C0Q4 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nek11Q8C0Q4 Sybu-209ENSMUST00000228639 4113 ntBASIC17.9■□□□□ 0.46
Nek11Q8C0Q4 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.9■□□□□ 0.46
Nek11Q8C0Q4 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Nek11Q8C0Q4 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nek11Q8C0Q4 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nek11Q8C0Q4 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.9■□□□□ 0.46
Nek11Q8C0Q4 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Nek11Q8C0Q4 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nek11Q8C0Q4 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.9■□□□□ 0.46
Nek11Q8C0Q4 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nek11Q8C0Q4 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.9■□□□□ 0.46
Nek11Q8C0Q4 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.9■□□□□ 0.46
Nek11Q8C0Q4 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Nek11Q8C0Q4 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.9■□□□□ 0.46
Nek11Q8C0Q4 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.9■□□□□ 0.46
Nek11Q8C0Q4 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nek11Q8C0Q4 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nek11Q8C0Q4 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nek11Q8C0Q4 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nek11Q8C0Q4 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms