Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3rf2Q8BZT2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Sh3rf2Q8BZT2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3rf2Q8BZT2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf2Q8BZT2 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf2Q8BZT2 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Sh3rf2Q8BZT2 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf2Q8BZT2 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.31■□□□□ 0.04
Sh3rf2Q8BZT2 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.31■□□□□ 0.04
Sh3rf2Q8BZT2 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.31■□□□□ 0.04
Sh3rf2Q8BZT2 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.31■□□□□ 0.04
Sh3rf2Q8BZT2 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf2Q8BZT2 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf2Q8BZT2 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf2Q8BZT2 Gm6973-201ENSMUST00000117080 721 ntBASIC15.31■□□□□ 0.04
Sh3rf2Q8BZT2 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.31■□□□□ 0.04
Sh3rf2Q8BZT2 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf2Q8BZT2 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Sh3rf2Q8BZT2 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Sh3rf2Q8BZT2 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf2Q8BZT2 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.31■□□□□ 0.04
Sh3rf2Q8BZT2 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.31■□□□□ 0.04
Sh3rf2Q8BZT2 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf2Q8BZT2 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.31■□□□□ 0.04
Sh3rf2Q8BZT2 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.31■□□□□ 0.04
Sh3rf2Q8BZT2 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf2Q8BZT2 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf2Q8BZT2 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf2Q8BZT2 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf2Q8BZT2 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3rf2Q8BZT2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3rf2Q8BZT2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3rf2Q8BZT2 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3rf2Q8BZT2 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Sh3rf2Q8BZT2 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Sh3rf2Q8BZT2 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Sh3rf2Q8BZT2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3rf2Q8BZT2 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3rf2Q8BZT2 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3rf2Q8BZT2 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3rf2Q8BZT2 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
Sh3rf2Q8BZT2 Gm25948-201ENSMUST00000175334 112 ntBASIC15.3■□□□□ 0.04
Sh3rf2Q8BZT2 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3rf2Q8BZT2 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3rf2Q8BZT2 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.3■□□□□ 0.04
Sh3rf2Q8BZT2 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.3■□□□□ 0.04
Sh3rf2Q8BZT2 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3rf2Q8BZT2 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3rf2Q8BZT2 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3rf2Q8BZT2 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3rf2Q8BZT2 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3rf2Q8BZT2 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3rf2Q8BZT2 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3rf2Q8BZT2 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Sh3rf2Q8BZT2 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3rf2Q8BZT2 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3rf2Q8BZT2 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3rf2Q8BZT2 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3rf2Q8BZT2 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3rf2Q8BZT2 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3rf2Q8BZT2 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3rf2Q8BZT2 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3rf2Q8BZT2 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Sh3rf2Q8BZT2 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3rf2Q8BZT2 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3rf2Q8BZT2 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.29■□□□□ 0.04
Sh3rf2Q8BZT2 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3rf2Q8BZT2 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3rf2Q8BZT2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3rf2Q8BZT2 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.29■□□□□ 0.04
Sh3rf2Q8BZT2 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.29■□□□□ 0.04
Sh3rf2Q8BZT2 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3rf2Q8BZT2 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3rf2Q8BZT2 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Sh3rf2Q8BZT2 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3rf2Q8BZT2 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.29■□□□□ 0.04
Sh3rf2Q8BZT2 Prob1-201ENSMUST00000097619 3021 ntBASIC15.29■□□□□ 0.04
Sh3rf2Q8BZT2 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3rf2Q8BZT2 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Sh3rf2Q8BZT2 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3rf2Q8BZT2 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Sh3rf2Q8BZT2 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3rf2Q8BZT2 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf2Q8BZT2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf2Q8BZT2 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Sh3rf2Q8BZT2 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf2Q8BZT2 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf2Q8BZT2 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf2Q8BZT2 Mir449b-201ENSMUST00000104833 80 ntBASIC15.28■□□□□ 0.04
Sh3rf2Q8BZT2 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf2Q8BZT2 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Sh3rf2Q8BZT2 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.28■□□□□ 0.04
Sh3rf2Q8BZT2 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf2Q8BZT2 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf2Q8BZT2 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf2Q8BZT2 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.28■□□□□ 0.04
Sh3rf2Q8BZT2 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf2Q8BZT2 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.28■□□□□ 0.04
Sh3rf2Q8BZT2 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf2Q8BZT2 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms