Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ppp1r3eQ8BRJ4 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ppp1r3eQ8BRJ4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ppp1r3eQ8BRJ4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ppp1r3eQ8BRJ4 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ppp1r3eQ8BRJ4 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ppp1r3eQ8BRJ4 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ppp1r3eQ8BRJ4 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ppp1r3eQ8BRJ4 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.19□□□□□ -0.14
Ppp1r3eQ8BRJ4 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ppp1r3eQ8BRJ4 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ppp1r3eQ8BRJ4 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ppp1r3eQ8BRJ4 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ppp1r3eQ8BRJ4 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ppp1r3eQ8BRJ4 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ppp1r3eQ8BRJ4 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ppp1r3eQ8BRJ4 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ppp1r3eQ8BRJ4 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ppp1r3eQ8BRJ4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ppp1r3eQ8BRJ4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.18□□□□□ -0.14
Ppp1r3eQ8BRJ4 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.18□□□□□ -0.14
Ppp1r3eQ8BRJ4 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ppp1r3eQ8BRJ4 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Ppp1r3eQ8BRJ4 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ppp1r3eQ8BRJ4 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ppp1r3eQ8BRJ4 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.18□□□□□ -0.14
Ppp1r3eQ8BRJ4 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ppp1r3eQ8BRJ4 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.18□□□□□ -0.14
Ppp1r3eQ8BRJ4 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ppp1r3eQ8BRJ4 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ppp1r3eQ8BRJ4 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 Gm24589-201ENSMUST00000116692 94 ntBASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 Rprl3-201ENSMUST00000157400 290 ntBASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 Gm8318-201ENSMUST00000182954 872 ntBASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.17□□□□□ -0.14
Ppp1r3eQ8BRJ4 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 Gm8344-201ENSMUST00000119813 856 ntBASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ppp1r3eQ8BRJ4 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ppp1r3eQ8BRJ4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms