Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scfd1Q8BRF7 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scfd1Q8BRF7 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scfd1Q8BRF7 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scfd1Q8BRF7 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Scfd1Q8BRF7 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scfd1Q8BRF7 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Scfd1Q8BRF7 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Scfd1Q8BRF7 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.25■□□□□ 0.35
Scfd1Q8BRF7 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.25■□□□□ 0.35
Scfd1Q8BRF7 Gm22175-201ENSMUST00000175007 78 ntBASIC17.25■□□□□ 0.35
Scfd1Q8BRF7 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scfd1Q8BRF7 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scfd1Q8BRF7 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scfd1Q8BRF7 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scfd1Q8BRF7 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Scfd1Q8BRF7 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scfd1Q8BRF7 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scfd1Q8BRF7 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Scfd1Q8BRF7 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scfd1Q8BRF7 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
Scfd1Q8BRF7 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Scfd1Q8BRF7 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.24■□□□□ 0.35
Scfd1Q8BRF7 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scfd1Q8BRF7 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scfd1Q8BRF7 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scfd1Q8BRF7 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scfd1Q8BRF7 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Scfd1Q8BRF7 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scfd1Q8BRF7 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scfd1Q8BRF7 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scfd1Q8BRF7 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scfd1Q8BRF7 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Scfd1Q8BRF7 Gm38225-201ENSMUST00000194001 393 ntBASIC17.24■□□□□ 0.35
Scfd1Q8BRF7 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.24■□□□□ 0.35
Scfd1Q8BRF7 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scfd1Q8BRF7 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scfd1Q8BRF7 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scfd1Q8BRF7 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Scfd1Q8BRF7 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scfd1Q8BRF7 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scfd1Q8BRF7 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Scfd1Q8BRF7 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scfd1Q8BRF7 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scfd1Q8BRF7 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scfd1Q8BRF7 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scfd1Q8BRF7 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scfd1Q8BRF7 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scfd1Q8BRF7 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.22■□□□□ 0.35
Scfd1Q8BRF7 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scfd1Q8BRF7 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scfd1Q8BRF7 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scfd1Q8BRF7 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scfd1Q8BRF7 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scfd1Q8BRF7 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scfd1Q8BRF7 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scfd1Q8BRF7 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scfd1Q8BRF7 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scfd1Q8BRF7 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scfd1Q8BRF7 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.22■□□□□ 0.35
Scfd1Q8BRF7 Gm27920-201ENSMUST00000183953 96 ntBASIC17.22■□□□□ 0.35
Scfd1Q8BRF7 Gm27430-201ENSMUST00000184585 107 ntBASIC17.22■□□□□ 0.35
Scfd1Q8BRF7 Gm44333-201ENSMUST00000197168 107 ntBASIC17.22■□□□□ 0.35
Scfd1Q8BRF7 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms