Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 Efs-202ENSMUST00000227037 2540 ntBASIC12.52□□□□□ -0.41
Smco3Q8BQM7 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.52□□□□□ -0.41
Smco3Q8BQM7 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smco3Q8BQM7 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Smco3Q8BQM7 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smco3Q8BQM7 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smco3Q8BQM7 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Smco3Q8BQM7 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.51□□□□□ -0.41
Smco3Q8BQM7 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smco3Q8BQM7 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Smco3Q8BQM7 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.51□□□□□ -0.41
Smco3Q8BQM7 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smco3Q8BQM7 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smco3Q8BQM7 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smco3Q8BQM7 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smco3Q8BQM7 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.51□□□□□ -0.41
Smco3Q8BQM7 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smco3Q8BQM7 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smco3Q8BQM7 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smco3Q8BQM7 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smco3Q8BQM7 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Smco3Q8BQM7 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smco3Q8BQM7 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smco3Q8BQM7 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.51□□□□□ -0.41
Smco3Q8BQM7 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.51□□□□□ -0.41
Smco3Q8BQM7 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smco3Q8BQM7 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smco3Q8BQM7 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.51□□□□□ -0.41
Smco3Q8BQM7 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smco3Q8BQM7 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smco3Q8BQM7 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.51□□□□□ -0.41
Smco3Q8BQM7 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smco3Q8BQM7 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Smco3Q8BQM7 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Smco3Q8BQM7 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Smco3Q8BQM7 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco3Q8BQM7 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Smco3Q8BQM7 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco3Q8BQM7 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco3Q8BQM7 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco3Q8BQM7 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.5□□□□□ -0.41
Smco3Q8BQM7 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smco3Q8BQM7 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.5□□□□□ -0.41
Smco3Q8BQM7 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Smco3Q8BQM7 Gm20760-201ENSMUST00000179197 648 ntBASIC12.5□□□□□ -0.41
Smco3Q8BQM7 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco3Q8BQM7 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Smco3Q8BQM7 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco3Q8BQM7 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Smco3Q8BQM7 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Smco3Q8BQM7 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco3Q8BQM7 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco3Q8BQM7 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco3Q8BQM7 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco3Q8BQM7 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smco3Q8BQM7 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco3Q8BQM7 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco3Q8BQM7 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.5□□□□□ -0.41
Smco3Q8BQM7 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Smco3Q8BQM7 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco3Q8BQM7 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco3Q8BQM7 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.5□□□□□ -0.41
Smco3Q8BQM7 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco3Q8BQM7 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Smco3Q8BQM7 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Smco3Q8BQM7 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smco3Q8BQM7 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Gm10653-202ENSMUST00000139570 835 ntBASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Gm6257-201ENSMUST00000163864 910 ntBASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Gm10052-201ENSMUST00000168019 960 ntBASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smco3Q8BQM7 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms