Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Ckap4Q8BMK4 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.37□□□□□ -0.11
Ckap4Q8BMK4 Gm18669-201ENSMUST00000216049 778 ntBASIC14.37□□□□□ -0.11
Ckap4Q8BMK4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ckap4Q8BMK4 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ckap4Q8BMK4 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ckap4Q8BMK4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ckap4Q8BMK4 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ckap4Q8BMK4 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ckap4Q8BMK4 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ckap4Q8BMK4 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ckap4Q8BMK4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ckap4Q8BMK4 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ckap4Q8BMK4 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ckap4Q8BMK4 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ckap4Q8BMK4 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ckap4Q8BMK4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ckap4Q8BMK4 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ckap4Q8BMK4 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ckap4Q8BMK4 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ckap4Q8BMK4 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ckap4Q8BMK4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ckap4Q8BMK4 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.35□□□□□ -0.11
Ckap4Q8BMK4 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ckap4Q8BMK4 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ckap4Q8BMK4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ckap4Q8BMK4 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ckap4Q8BMK4 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ckap4Q8BMK4 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ckap4Q8BMK4 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ckap4Q8BMK4 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ckap4Q8BMK4 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.35□□□□□ -0.11
Ckap4Q8BMK4 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ckap4Q8BMK4 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ckap4Q8BMK4 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ckap4Q8BMK4 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ckap4Q8BMK4 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ckap4Q8BMK4 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Ckap4Q8BMK4 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ckap4Q8BMK4 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ckap4Q8BMK4 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ckap4Q8BMK4 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ckap4Q8BMK4 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ckap4Q8BMK4 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ckap4Q8BMK4 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.34□□□□□ -0.11
Ckap4Q8BMK4 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Ckap4Q8BMK4 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.34□□□□□ -0.11
Ckap4Q8BMK4 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ckap4Q8BMK4 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ckap4Q8BMK4 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.34□□□□□ -0.11
Ckap4Q8BMK4 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Ckap4Q8BMK4 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ckap4Q8BMK4 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ckap4Q8BMK4 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ckap4Q8BMK4 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.34□□□□□ -0.11
Ckap4Q8BMK4 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.34□□□□□ -0.11
Ckap4Q8BMK4 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.34□□□□□ -0.11
Ckap4Q8BMK4 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ckap4Q8BMK4 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ckap4Q8BMK4 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ckap4Q8BMK4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ckap4Q8BMK4 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ckap4Q8BMK4 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ckap4Q8BMK4 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Ckap4Q8BMK4 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.34□□□□□ -0.11
Ckap4Q8BMK4 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms