Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Prpf18Q8BM39 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf18Q8BM39 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Prpf18Q8BM39 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Prpf18Q8BM39 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.46□□□□□ -0.09
Prpf18Q8BM39 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf18Q8BM39 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf18Q8BM39 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Prpf18Q8BM39 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Prpf18Q8BM39 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
Prpf18Q8BM39 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Prpf18Q8BM39 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Prpf18Q8BM39 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Prpf18Q8BM39 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Prpf18Q8BM39 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Prpf18Q8BM39 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Prpf18Q8BM39 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf18Q8BM39 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf18Q8BM39 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf18Q8BM39 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.45□□□□□ -0.1
Prpf18Q8BM39 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Prpf18Q8BM39 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf18Q8BM39 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Prpf18Q8BM39 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf18Q8BM39 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf18Q8BM39 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf18Q8BM39 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Prpf18Q8BM39 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf18Q8BM39 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf18Q8BM39 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf18Q8BM39 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.45□□□□□ -0.1
Prpf18Q8BM39 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf18Q8BM39 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf18Q8BM39 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf18Q8BM39 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf18Q8BM39 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf18Q8BM39 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf18Q8BM39 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf18Q8BM39 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf18Q8BM39 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Prpf18Q8BM39 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf18Q8BM39 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf18Q8BM39 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf18Q8BM39 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.45□□□□□ -0.1
Prpf18Q8BM39 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf18Q8BM39 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf18Q8BM39 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf18Q8BM39 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf18Q8BM39 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf18Q8BM39 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf18Q8BM39 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
Prpf18Q8BM39 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf18Q8BM39 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.44□□□□□ -0.1
Prpf18Q8BM39 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Prpf18Q8BM39 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.44□□□□□ -0.1
Prpf18Q8BM39 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf18Q8BM39 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf18Q8BM39 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf18Q8BM39 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf18Q8BM39 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Prpf18Q8BM39 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
Prpf18Q8BM39 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf18Q8BM39 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Prpf18Q8BM39 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.44□□□□□ -0.1
Prpf18Q8BM39 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf18Q8BM39 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf18Q8BM39 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf18Q8BM39 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf18Q8BM39 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf18Q8BM39 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf18Q8BM39 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.44□□□□□ -0.1
Prpf18Q8BM39 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf18Q8BM39 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.44□□□□□ -0.1
Prpf18Q8BM39 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf18Q8BM39 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Prpf18Q8BM39 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Prpf18Q8BM39 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Prpf18Q8BM39 Efs-202ENSMUST00000227037 2540 ntBASIC14.44□□□□□ -0.1
Prpf18Q8BM39 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf18Q8BM39 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf18Q8BM39 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Prpf18Q8BM39 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf18Q8BM39 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.43□□□□□ -0.1
Prpf18Q8BM39 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf18Q8BM39 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf18Q8BM39 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf18Q8BM39 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf18Q8BM39 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf18Q8BM39 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf18Q8BM39 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf18Q8BM39 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf18Q8BM39 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf18Q8BM39 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.43□□□□□ -0.1
Prpf18Q8BM39 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf18Q8BM39 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.43□□□□□ -0.1
Prpf18Q8BM39 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.43□□□□□ -0.1
Prpf18Q8BM39 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Prpf18Q8BM39 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf18Q8BM39 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.43□□□□□ -0.1
Prpf18Q8BM39 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms