Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
Col16a1Q8BLX7 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col16a1Q8BLX7 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC19.61■□□□□ 0.73
Col16a1Q8BLX7 AC156016.3-201ENSMUST00000228623 344 ntBASIC19.61■□□□□ 0.73
Col16a1Q8BLX7 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col16a1Q8BLX7 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC19.61■□□□□ 0.73
Col16a1Q8BLX7 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col16a1Q8BLX7 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col16a1Q8BLX7 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.61■□□□□ 0.73
Col16a1Q8BLX7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col16a1Q8BLX7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Col16a1Q8BLX7 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col16a1Q8BLX7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col16a1Q8BLX7 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col16a1Q8BLX7 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col16a1Q8BLX7 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col16a1Q8BLX7 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col16a1Q8BLX7 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col16a1Q8BLX7 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Col16a1Q8BLX7 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC19.61■□□□□ 0.73
Col16a1Q8BLX7 Gm45453-201ENSMUST00000211758 853 ntBASIC19.61■□□□□ 0.73
Col16a1Q8BLX7 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col16a1Q8BLX7 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
Col16a1Q8BLX7 Gm9899-201ENSMUST00000065519 555 ntBASIC19.61■□□□□ 0.73
Col16a1Q8BLX7 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Col16a1Q8BLX7 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col16a1Q8BLX7 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col16a1Q8BLX7 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col16a1Q8BLX7 Tfap2a-203ENSMUST00000223869 2037 ntBASIC19.6■□□□□ 0.73
Col16a1Q8BLX7 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col16a1Q8BLX7 Gm7820-201ENSMUST00000121012 1052 ntBASIC19.6■□□□□ 0.73
Col16a1Q8BLX7 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col16a1Q8BLX7 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col16a1Q8BLX7 Gm10766-202ENSMUST00000194123 606 ntBASIC19.6■□□□□ 0.73
Col16a1Q8BLX7 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Col16a1Q8BLX7 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col16a1Q8BLX7 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC19.6■□□□□ 0.73
Col16a1Q8BLX7 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col16a1Q8BLX7 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col16a1Q8BLX7 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col16a1Q8BLX7 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col16a1Q8BLX7 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col16a1Q8BLX7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col16a1Q8BLX7 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col16a1Q8BLX7 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col16a1Q8BLX7 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col16a1Q8BLX7 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col16a1Q8BLX7 Gm6944-201ENSMUST00000182449 1006 ntBASIC19.59■□□□□ 0.73
Col16a1Q8BLX7 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col16a1Q8BLX7 Gm7390-201ENSMUST00000212452 1216 ntBASIC19.59■□□□□ 0.73
Col16a1Q8BLX7 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col16a1Q8BLX7 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col16a1Q8BLX7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col16a1Q8BLX7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col16a1Q8BLX7 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col16a1Q8BLX7 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col16a1Q8BLX7 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col16a1Q8BLX7 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col16a1Q8BLX7 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Col16a1Q8BLX7 Gm6266-201ENSMUST00000203844 806 ntBASIC19.58■□□□□ 0.73
Col16a1Q8BLX7 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col16a1Q8BLX7 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col16a1Q8BLX7 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col16a1Q8BLX7 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col16a1Q8BLX7 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Col16a1Q8BLX7 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col16a1Q8BLX7 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col16a1Q8BLX7 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Col16a1Q8BLX7 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col16a1Q8BLX7 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC19.57■□□□□ 0.72
Col16a1Q8BLX7 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col16a1Q8BLX7 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC19.57■□□□□ 0.72
Col16a1Q8BLX7 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col16a1Q8BLX7 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col16a1Q8BLX7 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col16a1Q8BLX7 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col16a1Q8BLX7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col16a1Q8BLX7 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col16a1Q8BLX7 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.57■□□□□ 0.72
Col16a1Q8BLX7 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col16a1Q8BLX7 Gm43195-201ENSMUST00000200614 2332 ntBASIC19.57■□□□□ 0.72
Col16a1Q8BLX7 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col16a1Q8BLX7 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col16a1Q8BLX7 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col16a1Q8BLX7 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col16a1Q8BLX7 Gm8749-201ENSMUST00000117737 331 ntBASIC19.57■□□□□ 0.72
Col16a1Q8BLX7 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC19.57■□□□□ 0.72
Col16a1Q8BLX7 Gm17150-201ENSMUST00000165577 381 ntBASIC19.57■□□□□ 0.72
Col16a1Q8BLX7 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Col16a1Q8BLX7 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col16a1Q8BLX7 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col16a1Q8BLX7 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col16a1Q8BLX7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col16a1Q8BLX7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Col16a1Q8BLX7 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Col16a1Q8BLX7 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col16a1Q8BLX7 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC19.56■□□□□ 0.72
Col16a1Q8BLX7 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col16a1Q8BLX7 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col16a1Q8BLX7 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms