Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nop53Q8BK35 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nop53Q8BK35 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nop53Q8BK35 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nop53Q8BK35 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nop53Q8BK35 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nop53Q8BK35 Gm8344-201ENSMUST00000119813 856 ntBASIC16.24■□□□□ 0.19
Nop53Q8BK35 Gm27867-201ENSMUST00000184778 125 ntBASIC16.24■□□□□ 0.19
Nop53Q8BK35 Gm27459-201ENSMUST00000184860 107 ntBASIC16.24■□□□□ 0.19
Nop53Q8BK35 Gm18622-201ENSMUST00000219361 595 ntBASIC16.24■□□□□ 0.19
Nop53Q8BK35 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nop53Q8BK35 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Nop53Q8BK35 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nop53Q8BK35 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.24■□□□□ 0.19
Nop53Q8BK35 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nop53Q8BK35 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.23■□□□□ 0.19
Nop53Q8BK35 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nop53Q8BK35 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nop53Q8BK35 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nop53Q8BK35 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Nop53Q8BK35 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nop53Q8BK35 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nop53Q8BK35 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.23■□□□□ 0.19
Nop53Q8BK35 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.23■□□□□ 0.19
Nop53Q8BK35 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.23■□□□□ 0.19
Nop53Q8BK35 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nop53Q8BK35 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nop53Q8BK35 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nop53Q8BK35 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nop53Q8BK35 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nop53Q8BK35 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nop53Q8BK35 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nop53Q8BK35 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Nop53Q8BK35 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nop53Q8BK35 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nop53Q8BK35 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nop53Q8BK35 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Nop53Q8BK35 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Nop53Q8BK35 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nop53Q8BK35 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nop53Q8BK35 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nop53Q8BK35 Grk6-207ENSMUST00000225925 2769 ntBASIC16.22■□□□□ 0.19
Nop53Q8BK35 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nop53Q8BK35 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nop53Q8BK35 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nop53Q8BK35 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nop53Q8BK35 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nop53Q8BK35 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nop53Q8BK35 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nop53Q8BK35 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nop53Q8BK35 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Nop53Q8BK35 Gm12497-201ENSMUST00000138778 237 ntBASIC16.22■□□□□ 0.19
Nop53Q8BK35 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nop53Q8BK35 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.22■□□□□ 0.19
Nop53Q8BK35 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nop53Q8BK35 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Nop53Q8BK35 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.22■□□□□ 0.19
Nop53Q8BK35 Gm7461-201ENSMUST00000058918 827 ntBASIC16.22■□□□□ 0.19
Nop53Q8BK35 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nop53Q8BK35 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nop53Q8BK35 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.22■□□□□ 0.19
Nop53Q8BK35 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nop53Q8BK35 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nop53Q8BK35 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nop53Q8BK35 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nop53Q8BK35 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nop53Q8BK35 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nop53Q8BK35 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nop53Q8BK35 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Nop53Q8BK35 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Nop53Q8BK35 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Nop53Q8BK35 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nop53Q8BK35 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.22■□□□□ 0.19
Nop53Q8BK35 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nop53Q8BK35 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nop53Q8BK35 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nop53Q8BK35 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nop53Q8BK35 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nop53Q8BK35 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nop53Q8BK35 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nop53Q8BK35 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Nop53Q8BK35 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Nop53Q8BK35 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nop53Q8BK35 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Nop53Q8BK35 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nop53Q8BK35 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Nop53Q8BK35 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Nop53Q8BK35 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nop53Q8BK35 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nop53Q8BK35 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.21■□□□□ 0.19
Nop53Q8BK35 Gm4459-201ENSMUST00000118750 468 ntBASIC16.21■□□□□ 0.19
Nop53Q8BK35 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.21■□□□□ 0.19
Nop53Q8BK35 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nop53Q8BK35 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.21■□□□□ 0.19
Nop53Q8BK35 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.21■□□□□ 0.19
Nop53Q8BK35 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.21■□□□□ 0.19
Nop53Q8BK35 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Nop53Q8BK35 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Nop53Q8BK35 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nop53Q8BK35 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms