Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc40Q8BI79 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc40Q8BI79 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc40Q8BI79 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc40Q8BI79 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc40Q8BI79 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc40Q8BI79 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.85■□□□□ 0.13
Ccdc40Q8BI79 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc40Q8BI79 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc40Q8BI79 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.84■□□□□ 0.13
Ccdc40Q8BI79 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Ccdc40Q8BI79 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.84■□□□□ 0.13
Ccdc40Q8BI79 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc40Q8BI79 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc40Q8BI79 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc40Q8BI79 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc40Q8BI79 Gm8097-201ENSMUST00000117903 829 ntBASIC15.84■□□□□ 0.13
Ccdc40Q8BI79 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Ccdc40Q8BI79 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.84■□□□□ 0.13
Ccdc40Q8BI79 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.84■□□□□ 0.13
Ccdc40Q8BI79 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.84■□□□□ 0.13
Ccdc40Q8BI79 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Ccdc40Q8BI79 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc40Q8BI79 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc40Q8BI79 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc40Q8BI79 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc40Q8BI79 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc40Q8BI79 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc40Q8BI79 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc40Q8BI79 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc40Q8BI79 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc40Q8BI79 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc40Q8BI79 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ccdc40Q8BI79 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
Ccdc40Q8BI79 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Ccdc40Q8BI79 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Ccdc40Q8BI79 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Ccdc40Q8BI79 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc40Q8BI79 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc40Q8BI79 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc40Q8BI79 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.83■□□□□ 0.12
Ccdc40Q8BI79 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc40Q8BI79 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Ccdc40Q8BI79 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc40Q8BI79 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc40Q8BI79 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.83■□□□□ 0.12
Ccdc40Q8BI79 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc40Q8BI79 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc40Q8BI79 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc40Q8BI79 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc40Q8BI79 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc40Q8BI79 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc40Q8BI79 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc40Q8BI79 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Ccdc40Q8BI79 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc40Q8BI79 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc40Q8BI79 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc40Q8BI79 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.83■□□□□ 0.12
Ccdc40Q8BI79 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc40Q8BI79 Rubie-203ENSMUST00000227803 2430 ntBASIC15.83■□□□□ 0.12
Ccdc40Q8BI79 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.83■□□□□ 0.12
Ccdc40Q8BI79 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc40Q8BI79 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc40Q8BI79 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc40Q8BI79 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc40Q8BI79 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc40Q8BI79 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc40Q8BI79 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc40Q8BI79 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc40Q8BI79 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc40Q8BI79 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc40Q8BI79 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc40Q8BI79 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc40Q8BI79 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc40Q8BI79 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc40Q8BI79 Gm9103-201ENSMUST00000119371 405 ntBASIC15.82■□□□□ 0.12
Ccdc40Q8BI79 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc40Q8BI79 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.82■□□□□ 0.12
Ccdc40Q8BI79 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.82■□□□□ 0.12
Ccdc40Q8BI79 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc40Q8BI79 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.82■□□□□ 0.12
Ccdc40Q8BI79 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ccdc40Q8BI79 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.82■□□□□ 0.12
Ccdc40Q8BI79 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc40Q8BI79 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.82■□□□□ 0.12
Ccdc40Q8BI79 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc40Q8BI79 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.82■□□□□ 0.12
Ccdc40Q8BI79 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc40Q8BI79 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc40Q8BI79 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc40Q8BI79 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc40Q8BI79 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.82■□□□□ 0.12
Ccdc40Q8BI79 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc40Q8BI79 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc40Q8BI79 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc40Q8BI79 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc40Q8BI79 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Ccdc40Q8BI79 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.81■□□□□ 0.12
Ccdc40Q8BI79 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc40Q8BI79 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms