Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Slc5a7Q8BGY9 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.29□□□□□ -0.28
Slc5a7Q8BGY9 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc5a7Q8BGY9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.29□□□□□ -0.28
Slc5a7Q8BGY9 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc5a7Q8BGY9 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc5a7Q8BGY9 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc5a7Q8BGY9 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc5a7Q8BGY9 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Slc5a7Q8BGY9 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Slc5a7Q8BGY9 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Slc5a7Q8BGY9 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc5a7Q8BGY9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.28□□□□□ -0.28
Slc5a7Q8BGY9 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc5a7Q8BGY9 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.28□□□□□ -0.28
Slc5a7Q8BGY9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Slc5a7Q8BGY9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.28□□□□□ -0.28
Slc5a7Q8BGY9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.28□□□□□ -0.28
Slc5a7Q8BGY9 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.28□□□□□ -0.28
Slc5a7Q8BGY9 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Slc5a7Q8BGY9 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc5a7Q8BGY9 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Slc5a7Q8BGY9 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Slc5a7Q8BGY9 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc5a7Q8BGY9 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Slc5a7Q8BGY9 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc5a7Q8BGY9 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.28□□□□□ -0.28
Slc5a7Q8BGY9 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc5a7Q8BGY9 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc5a7Q8BGY9 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Slc5a7Q8BGY9 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc5a7Q8BGY9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc5a7Q8BGY9 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.28□□□□□ -0.28
Slc5a7Q8BGY9 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc5a7Q8BGY9 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Slc5a7Q8BGY9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slc5a7Q8BGY9 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slc5a7Q8BGY9 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slc5a7Q8BGY9 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Slc5a7Q8BGY9 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Slc5a7Q8BGY9 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Slc5a7Q8BGY9 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slc5a7Q8BGY9 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slc5a7Q8BGY9 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slc5a7Q8BGY9 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slc5a7Q8BGY9 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Slc5a7Q8BGY9 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slc5a7Q8BGY9 Gm37722-201ENSMUST00000193757 208 ntBASIC13.27□□□□□ -0.29
Slc5a7Q8BGY9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.27□□□□□ -0.29
Slc5a7Q8BGY9 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.27□□□□□ -0.29
Slc5a7Q8BGY9 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slc5a7Q8BGY9 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slc5a7Q8BGY9 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Slc5a7Q8BGY9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.27□□□□□ -0.29
Slc5a7Q8BGY9 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slc5a7Q8BGY9 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slc5a7Q8BGY9 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Slc5a7Q8BGY9 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Slc5a7Q8BGY9 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slc5a7Q8BGY9 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Slc5a7Q8BGY9 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Slc5a7Q8BGY9 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc5a7Q8BGY9 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Slc5a7Q8BGY9 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc5a7Q8BGY9 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.26□□□□□ -0.29
Slc5a7Q8BGY9 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc5a7Q8BGY9 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc5a7Q8BGY9 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc5a7Q8BGY9 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Slc5a7Q8BGY9 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc5a7Q8BGY9 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Slc5a7Q8BGY9 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc5a7Q8BGY9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc5a7Q8BGY9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Slc5a7Q8BGY9 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc5a7Q8BGY9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Slc5a7Q8BGY9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC13.26□□□□□ -0.29
Slc5a7Q8BGY9 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Slc5a7Q8BGY9 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc5a7Q8BGY9 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Slc5a7Q8BGY9 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Slc5a7Q8BGY9 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc5a7Q8BGY9 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Slc5a7Q8BGY9 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc5a7Q8BGY9 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Slc5a7Q8BGY9 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc5a7Q8BGY9 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc5a7Q8BGY9 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc5a7Q8BGY9 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc5a7Q8BGY9 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc5a7Q8BGY9 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.25□□□□□ -0.29
Slc5a7Q8BGY9 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc5a7Q8BGY9 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc5a7Q8BGY9 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc5a7Q8BGY9 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc5a7Q8BGY9 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Slc5a7Q8BGY9 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc5a7Q8BGY9 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Slc5a7Q8BGY9 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.25□□□□□ -0.29
Slc5a7Q8BGY9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms