Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4dQ8BGV9 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4dQ8BGV9 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4dQ8BGV9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4dQ8BGV9 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4dQ8BGV9 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4dQ8BGV9 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4dQ8BGV9 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4dQ8BGV9 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4dQ8BGV9 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4dQ8BGV9 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4dQ8BGV9 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Atg4dQ8BGV9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4dQ8BGV9 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Gm44492-201ENSMUST00000197012 141 ntBASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4dQ8BGV9 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Atg4dQ8BGV9 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.08□□□□□ -0.15
Atg4dQ8BGV9 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Atg4dQ8BGV9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.15
Atg4dQ8BGV9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4dQ8BGV9 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Atg4dQ8BGV9 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.08□□□□□ -0.16
Atg4dQ8BGV9 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.08□□□□□ -0.16
Atg4dQ8BGV9 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4dQ8BGV9 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Atg4dQ8BGV9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.08□□□□□ -0.16
Atg4dQ8BGV9 Gm27301-201ENSMUST00000184012 127 ntBASIC14.08□□□□□ -0.16
Atg4dQ8BGV9 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.08□□□□□ -0.16
Atg4dQ8BGV9 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.08□□□□□ -0.16
Atg4dQ8BGV9 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4dQ8BGV9 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4dQ8BGV9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4dQ8BGV9 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4dQ8BGV9 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4dQ8BGV9 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4dQ8BGV9 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4dQ8BGV9 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4dQ8BGV9 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4dQ8BGV9 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4dQ8BGV9 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Atg4dQ8BGV9 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4dQ8BGV9 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4dQ8BGV9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4dQ8BGV9 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4dQ8BGV9 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4dQ8BGV9 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4dQ8BGV9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4dQ8BGV9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4dQ8BGV9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4dQ8BGV9 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4dQ8BGV9 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4dQ8BGV9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Atg4dQ8BGV9 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4dQ8BGV9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4dQ8BGV9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4dQ8BGV9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.07□□□□□ -0.16
Atg4dQ8BGV9 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.07□□□□□ -0.16
Atg4dQ8BGV9 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.07□□□□□ -0.16
Atg4dQ8BGV9 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4dQ8BGV9 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.07□□□□□ -0.16
Atg4dQ8BGV9 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.07□□□□□ -0.16
Atg4dQ8BGV9 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.07□□□□□ -0.16
Atg4dQ8BGV9 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4dQ8BGV9 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4dQ8BGV9 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4dQ8BGV9 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms