Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atg4bQ8BGE6 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atg4bQ8BGE6 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.27□□□□□ -0.12
Atg4bQ8BGE6 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atg4bQ8BGE6 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atg4bQ8BGE6 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atg4bQ8BGE6 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Atg4bQ8BGE6 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atg4bQ8BGE6 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atg4bQ8BGE6 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atg4bQ8BGE6 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Atg4bQ8BGE6 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atg4bQ8BGE6 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atg4bQ8BGE6 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atg4bQ8BGE6 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.27□□□□□ -0.13
Atg4bQ8BGE6 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atg4bQ8BGE6 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.27□□□□□ -0.13
Atg4bQ8BGE6 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.27□□□□□ -0.13
Atg4bQ8BGE6 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atg4bQ8BGE6 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.27□□□□□ -0.13
Atg4bQ8BGE6 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Atg4bQ8BGE6 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atg4bQ8BGE6 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atg4bQ8BGE6 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Atg4bQ8BGE6 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Atg4bQ8BGE6 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Atg4bQ8BGE6 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Celf4-206ENSMUST00000224553 1729 ntBASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atg4bQ8BGE6 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms