Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.7■□□□□ 0.26
Usp6nlQ80XC3 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.7■□□□□ 0.26
Usp6nlQ80XC3 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp6nlQ80XC3 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Usp6nlQ80XC3 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Usp6nlQ80XC3 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp6nlQ80XC3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp6nlQ80XC3 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Usp6nlQ80XC3 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp6nlQ80XC3 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp6nlQ80XC3 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp6nlQ80XC3 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp6nlQ80XC3 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp6nlQ80XC3 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp6nlQ80XC3 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp6nlQ80XC3 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Usp6nlQ80XC3 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp6nlQ80XC3 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp6nlQ80XC3 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Usp6nlQ80XC3 Gm13015-201ENSMUST00000118674 204 ntBASIC16.69■□□□□ 0.26
Usp6nlQ80XC3 Gm23547-201ENSMUST00000158210 271 ntBASIC16.69■□□□□ 0.26
Usp6nlQ80XC3 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.69■□□□□ 0.26
Usp6nlQ80XC3 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Usp6nlQ80XC3 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Usp6nlQ80XC3 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.69■□□□□ 0.26
Usp6nlQ80XC3 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp6nlQ80XC3 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Usp6nlQ80XC3 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp6nlQ80XC3 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp6nlQ80XC3 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Usp6nlQ80XC3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Usp6nlQ80XC3 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp6nlQ80XC3 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Usp6nlQ80XC3 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.69■□□□□ 0.26
Usp6nlQ80XC3 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp6nlQ80XC3 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp6nlQ80XC3 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Usp6nlQ80XC3 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp6nlQ80XC3 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp6nlQ80XC3 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp6nlQ80XC3 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp6nlQ80XC3 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp6nlQ80XC3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Usp6nlQ80XC3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp6nlQ80XC3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp6nlQ80XC3 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Usp6nlQ80XC3 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Usp6nlQ80XC3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Usp6nlQ80XC3 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp6nlQ80XC3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Usp6nlQ80XC3 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Usp6nlQ80XC3 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Usp6nlQ80XC3 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Usp6nlQ80XC3 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp6nlQ80XC3 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp6nlQ80XC3 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp6nlQ80XC3 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp6nlQ80XC3 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp6nlQ80XC3 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp6nlQ80XC3 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp6nlQ80XC3 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp6nlQ80XC3 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Usp6nlQ80XC3 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp6nlQ80XC3 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Usp6nlQ80XC3 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.67■□□□□ 0.26
Usp6nlQ80XC3 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp6nlQ80XC3 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Usp6nlQ80XC3 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Usp6nlQ80XC3 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Usp6nlQ80XC3 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp6nlQ80XC3 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp6nlQ80XC3 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp6nlQ80XC3 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp6nlQ80XC3 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Usp6nlQ80XC3 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Usp6nlQ80XC3 Gm27989-201ENSMUST00000184721 107 ntBASIC16.67■□□□□ 0.26
Usp6nlQ80XC3 Gm17837-201ENSMUST00000186435 985 ntBASIC16.67■□□□□ 0.26
Usp6nlQ80XC3 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp6nlQ80XC3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Usp6nlQ80XC3 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Usp6nlQ80XC3 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.67■□□□□ 0.26
Usp6nlQ80XC3 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp6nlQ80XC3 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.66■□□□□ 0.26
Usp6nlQ80XC3 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp6nlQ80XC3 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp6nlQ80XC3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.66■□□□□ 0.26
Usp6nlQ80XC3 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.66■□□□□ 0.26
Usp6nlQ80XC3 Gm13453-201ENSMUST00000118708 357 ntBASIC16.66■□□□□ 0.26
Usp6nlQ80XC3 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.66■□□□□ 0.26
Usp6nlQ80XC3 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.66■□□□□ 0.26
Usp6nlQ80XC3 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.66■□□□□ 0.26
Usp6nlQ80XC3 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp6nlQ80XC3 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.66■□□□□ 0.26
Usp6nlQ80XC3 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp6nlQ80XC3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp6nlQ80XC3 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp6nlQ80XC3 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp6nlQ80XC3 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp6nlQ80XC3 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp6nlQ80XC3 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms