Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Srrm3Q80WV7 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Srrm3Q80WV7 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Srrm3Q80WV7 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Srrm3Q80WV7 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Srrm3Q80WV7 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Srrm3Q80WV7 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Srrm3Q80WV7 Gm1401-201ENSMUST00000122048 772 ntBASIC15.79■□□□□ 0.12
Srrm3Q80WV7 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Srrm3Q80WV7 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Srrm3Q80WV7 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Srrm3Q80WV7 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.79■□□□□ 0.12
Srrm3Q80WV7 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Srrm3Q80WV7 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Srrm3Q80WV7 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Srrm3Q80WV7 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Srrm3Q80WV7 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Srrm3Q80WV7 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Srrm3Q80WV7 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Srrm3Q80WV7 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Srrm3Q80WV7 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Srrm3Q80WV7 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Srrm3Q80WV7 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Srrm3Q80WV7 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Srrm3Q80WV7 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Srrm3Q80WV7 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Srrm3Q80WV7 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Srrm3Q80WV7 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Srrm3Q80WV7 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Srrm3Q80WV7 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Srrm3Q80WV7 Gm12895-201ENSMUST00000122214 226 ntBASIC15.78■□□□□ 0.12
Srrm3Q80WV7 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Srrm3Q80WV7 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.78■□□□□ 0.12
Srrm3Q80WV7 Gm5186-201ENSMUST00000218781 920 ntBASIC15.78■□□□□ 0.12
Srrm3Q80WV7 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.78■□□□□ 0.12
Srrm3Q80WV7 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Srrm3Q80WV7 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Srrm3Q80WV7 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Srrm3Q80WV7 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Srrm3Q80WV7 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Srrm3Q80WV7 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Srrm3Q80WV7 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.78■□□□□ 0.12
Srrm3Q80WV7 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Srrm3Q80WV7 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Srrm3Q80WV7 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Srrm3Q80WV7 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Srrm3Q80WV7 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Srrm3Q80WV7 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
Srrm3Q80WV7 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Srrm3Q80WV7 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.77■□□□□ 0.12
Srrm3Q80WV7 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Srrm3Q80WV7 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Srrm3Q80WV7 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Srrm3Q80WV7 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Srrm3Q80WV7 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Srrm3Q80WV7 Gm6736-201ENSMUST00000166583 948 ntBASIC15.77■□□□□ 0.12
Srrm3Q80WV7 Gm27702-201ENSMUST00000184512 56 ntBASIC15.77■□□□□ 0.12
Srrm3Q80WV7 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.77■□□□□ 0.12
Srrm3Q80WV7 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.77■□□□□ 0.12
Srrm3Q80WV7 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.77■□□□□ 0.12
Srrm3Q80WV7 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.77■□□□□ 0.12
Srrm3Q80WV7 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.77■□□□□ 0.12
Srrm3Q80WV7 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Srrm3Q80WV7 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Srrm3Q80WV7 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Srrm3Q80WV7 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Srrm3Q80WV7 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Srrm3Q80WV7 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Srrm3Q80WV7 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Srrm3Q80WV7 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Srrm3Q80WV7 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Srrm3Q80WV7 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.77■□□□□ 0.11
Srrm3Q80WV7 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.11
Srrm3Q80WV7 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Srrm3Q80WV7 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Srrm3Q80WV7 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Srrm3Q80WV7 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
Srrm3Q80WV7 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.76■□□□□ 0.11
Srrm3Q80WV7 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Srrm3Q80WV7 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.76■□□□□ 0.11
Srrm3Q80WV7 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Srrm3Q80WV7 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
Srrm3Q80WV7 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Srrm3Q80WV7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Srrm3Q80WV7 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.76■□□□□ 0.11
Srrm3Q80WV7 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Srrm3Q80WV7 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
Srrm3Q80WV7 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Srrm3Q80WV7 Gm12008-201ENSMUST00000117791 755 ntBASIC15.76■□□□□ 0.11
Srrm3Q80WV7 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.76■□□□□ 0.11
Srrm3Q80WV7 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Srrm3Q80WV7 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.76■□□□□ 0.11
Srrm3Q80WV7 Gm10576-201ENSMUST00000191927 825 ntBASIC15.76■□□□□ 0.11
Srrm3Q80WV7 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.76■□□□□ 0.11
Srrm3Q80WV7 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Srrm3Q80WV7 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Srrm3Q80WV7 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Srrm3Q80WV7 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Srrm3Q80WV7 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Srrm3Q80WV7 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms