Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf40bQ80W14 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf40bQ80W14 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Prpf40bQ80W14 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf40bQ80W14 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf40bQ80W14 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Prpf40bQ80W14 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf40bQ80W14 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf40bQ80W14 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf40bQ80W14 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf40bQ80W14 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Prpf40bQ80W14 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf40bQ80W14 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf40bQ80W14 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf40bQ80W14 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC17.47■□□□□ 0.39
Prpf40bQ80W14 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf40bQ80W14 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf40bQ80W14 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf40bQ80W14 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf40bQ80W14 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf40bQ80W14 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.46■□□□□ 0.39
Prpf40bQ80W14 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf40bQ80W14 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf40bQ80W14 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf40bQ80W14 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf40bQ80W14 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Prpf40bQ80W14 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Prpf40bQ80W14 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf40bQ80W14 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Prpf40bQ80W14 Gm27430-201ENSMUST00000184585 107 ntBASIC17.46■□□□□ 0.39
Prpf40bQ80W14 Gm44333-201ENSMUST00000197168 107 ntBASIC17.46■□□□□ 0.39
Prpf40bQ80W14 Gm7774-201ENSMUST00000200064 533 ntBASIC17.46■□□□□ 0.39
Prpf40bQ80W14 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.46■□□□□ 0.39
Prpf40bQ80W14 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf40bQ80W14 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf40bQ80W14 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Prpf40bQ80W14 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf40bQ80W14 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf40bQ80W14 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf40bQ80W14 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf40bQ80W14 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.38
Prpf40bQ80W14 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Prpf40bQ80W14 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf40bQ80W14 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf40bQ80W14 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf40bQ80W14 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf40bQ80W14 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf40bQ80W14 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf40bQ80W14 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf40bQ80W14 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf40bQ80W14 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Prpf40bQ80W14 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf40bQ80W14 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.45■□□□□ 0.38
Prpf40bQ80W14 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.45■□□□□ 0.38
Prpf40bQ80W14 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf40bQ80W14 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Prpf40bQ80W14 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.45■□□□□ 0.38
Prpf40bQ80W14 Gm18489-201ENSMUST00000172565 551 ntBASIC17.45■□□□□ 0.38
Prpf40bQ80W14 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf40bQ80W14 Gm20553-201ENSMUST00000204205 844 ntBASIC17.45■□□□□ 0.38
Prpf40bQ80W14 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf40bQ80W14 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Prpf40bQ80W14 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.45■□□□□ 0.38
Prpf40bQ80W14 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf40bQ80W14 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf40bQ80W14 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Prpf40bQ80W14 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf40bQ80W14 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf40bQ80W14 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf40bQ80W14 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf40bQ80W14 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf40bQ80W14 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Prpf40bQ80W14 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf40bQ80W14 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.44■□□□□ 0.38
Prpf40bQ80W14 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf40bQ80W14 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf40bQ80W14 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf40bQ80W14 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf40bQ80W14 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.44■□□□□ 0.38
Prpf40bQ80W14 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf40bQ80W14 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf40bQ80W14 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Prpf40bQ80W14 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Prpf40bQ80W14 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.44■□□□□ 0.38
Prpf40bQ80W14 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf40bQ80W14 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Prpf40bQ80W14 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.44■□□□□ 0.38
Prpf40bQ80W14 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Prpf40bQ80W14 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.44■□□□□ 0.38
Prpf40bQ80W14 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf40bQ80W14 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Prpf40bQ80W14 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf40bQ80W14 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Prpf40bQ80W14 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf40bQ80W14 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf40bQ80W14 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Prpf40bQ80W14 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf40bQ80W14 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Prpf40bQ80W14 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf40bQ80W14 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms