Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Gm43438-201ENSMUST00000198133 379 ntBASIC16.49■□□□□ 0.23
Sh3tc2Q80VA5 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.49■□□□□ 0.23
Sh3tc2Q80VA5 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3tc2Q80VA5 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3tc2Q80VA5 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3tc2Q80VA5 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3tc2Q80VA5 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3tc2Q80VA5 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3tc2Q80VA5 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Sh3tc2Q80VA5 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3tc2Q80VA5 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3tc2Q80VA5 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3tc2Q80VA5 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.48■□□□□ 0.23
Sh3tc2Q80VA5 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Sh3tc2Q80VA5 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3tc2Q80VA5 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.48■□□□□ 0.23
Sh3tc2Q80VA5 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Sh3tc2Q80VA5 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Sh3tc2Q80VA5 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3tc2Q80VA5 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Sh3tc2Q80VA5 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Sh3tc2Q80VA5 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.48■□□□□ 0.23
Sh3tc2Q80VA5 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.48■□□□□ 0.23
Sh3tc2Q80VA5 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3tc2Q80VA5 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Sh3tc2Q80VA5 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.48■□□□□ 0.23
Sh3tc2Q80VA5 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.48■□□□□ 0.23
Sh3tc2Q80VA5 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.48■□□□□ 0.23
Sh3tc2Q80VA5 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3tc2Q80VA5 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3tc2Q80VA5 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3tc2Q80VA5 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Sh3tc2Q80VA5 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3tc2Q80VA5 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.48■□□□□ 0.23
Sh3tc2Q80VA5 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3tc2Q80VA5 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3tc2Q80VA5 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Sh3tc2Q80VA5 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3tc2Q80VA5 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3tc2Q80VA5 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3tc2Q80VA5 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.47■□□□□ 0.23
Sh3tc2Q80VA5 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Sh3tc2Q80VA5 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3tc2Q80VA5 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3tc2Q80VA5 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.47■□□□□ 0.23
Sh3tc2Q80VA5 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3tc2Q80VA5 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3tc2Q80VA5 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3tc2Q80VA5 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3tc2Q80VA5 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.47■□□□□ 0.23
Sh3tc2Q80VA5 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3tc2Q80VA5 Gm27430-201ENSMUST00000184585 107 ntBASIC16.47■□□□□ 0.23
Sh3tc2Q80VA5 Mir6977-201ENSMUST00000184960 64 ntBASIC16.47■□□□□ 0.23
Sh3tc2Q80VA5 Gm44333-201ENSMUST00000197168 107 ntBASIC16.47■□□□□ 0.23
Sh3tc2Q80VA5 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.47■□□□□ 0.23
Sh3tc2Q80VA5 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.47■□□□□ 0.23
Sh3tc2Q80VA5 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.47■□□□□ 0.23
Sh3tc2Q80VA5 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3tc2Q80VA5 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3tc2Q80VA5 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Sh3tc2Q80VA5 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3tc2Q80VA5 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Sh3tc2Q80VA5 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3tc2Q80VA5 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3tc2Q80VA5 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3tc2Q80VA5 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3tc2Q80VA5 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Sh3tc2Q80VA5 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3tc2Q80VA5 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3tc2Q80VA5 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3tc2Q80VA5 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3tc2Q80VA5 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.46■□□□□ 0.23
Sh3tc2Q80VA5 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3tc2Q80VA5 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3tc2Q80VA5 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3tc2Q80VA5 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.46■□□□□ 0.23
Sh3tc2Q80VA5 Gm12008-201ENSMUST00000117791 755 ntBASIC16.46■□□□□ 0.23
Sh3tc2Q80VA5 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3tc2Q80VA5 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.46■□□□□ 0.23
Sh3tc2Q80VA5 Gm10253-201ENSMUST00000194270 940 ntBASIC16.46■□□□□ 0.23
Sh3tc2Q80VA5 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.46■□□□□ 0.23
Sh3tc2Q80VA5 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3tc2Q80VA5 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3tc2Q80VA5 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Sh3tc2Q80VA5 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.22
Sh3tc2Q80VA5 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Sh3tc2Q80VA5 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3tc2Q80VA5 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3tc2Q80VA5 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.45■□□□□ 0.22
Sh3tc2Q80VA5 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.45■□□□□ 0.22
Sh3tc2Q80VA5 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Sh3tc2Q80VA5 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3tc2Q80VA5 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3tc2Q80VA5 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3tc2Q80VA5 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3tc2Q80VA5 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3tc2Q80VA5 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3tc2Q80VA5 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.45■□□□□ 0.22
Sh3tc2Q80VA5 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.45■□□□□ 0.22
Sh3tc2Q80VA5 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms