Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pif1Q80SX8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pif1Q80SX8 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pif1Q80SX8 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pif1Q80SX8 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pif1Q80SX8 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pif1Q80SX8 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Pif1Q80SX8 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pif1Q80SX8 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pif1Q80SX8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pif1Q80SX8 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pif1Q80SX8 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pif1Q80SX8 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pif1Q80SX8 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pif1Q80SX8 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pif1Q80SX8 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.97□□□□□ -0.17
Pif1Q80SX8 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pif1Q80SX8 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pif1Q80SX8 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pif1Q80SX8 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pif1Q80SX8 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.97□□□□□ -0.17
Pif1Q80SX8 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.97□□□□□ -0.17
Pif1Q80SX8 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.97□□□□□ -0.17
Pif1Q80SX8 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pif1Q80SX8 Gm20949-201ENSMUST00000206478 952 ntBASIC13.97□□□□□ -0.17
Pif1Q80SX8 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.97□□□□□ -0.17
Pif1Q80SX8 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pif1Q80SX8 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pif1Q80SX8 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pif1Q80SX8 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Pif1Q80SX8 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pif1Q80SX8 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pif1Q80SX8 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.97□□□□□ -0.17
Pif1Q80SX8 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pif1Q80SX8 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pif1Q80SX8 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Pif1Q80SX8 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pif1Q80SX8 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pif1Q80SX8 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pif1Q80SX8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
Pif1Q80SX8 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pif1Q80SX8 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pif1Q80SX8 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pif1Q80SX8 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pif1Q80SX8 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pif1Q80SX8 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Pif1Q80SX8 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pif1Q80SX8 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Pif1Q80SX8 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pif1Q80SX8 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pif1Q80SX8 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pif1Q80SX8 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pif1Q80SX8 Gm16198-201ENSMUST00000118766 670 ntBASIC13.96□□□□□ -0.17
Pif1Q80SX8 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pif1Q80SX8 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Pif1Q80SX8 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pif1Q80SX8 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pif1Q80SX8 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pif1Q80SX8 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pif1Q80SX8 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.96□□□□□ -0.17
Pif1Q80SX8 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pif1Q80SX8 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Pif1Q80SX8 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pif1Q80SX8 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pif1Q80SX8 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pif1Q80SX8 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pif1Q80SX8 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.96□□□□□ -0.17
Pif1Q80SX8 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pif1Q80SX8 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pif1Q80SX8 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pif1Q80SX8 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pif1Q80SX8 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
Pif1Q80SX8 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Pif1Q80SX8 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Pif1Q80SX8 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pif1Q80SX8 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pif1Q80SX8 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pif1Q80SX8 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.95□□□□□ -0.18
Pif1Q80SX8 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pif1Q80SX8 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pif1Q80SX8 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pif1Q80SX8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Pif1Q80SX8 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.95□□□□□ -0.18
Pif1Q80SX8 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Pif1Q80SX8 Gm27321-201ENSMUST00000185021 205 ntBASIC13.95□□□□□ -0.18
Pif1Q80SX8 Gm44487-201ENSMUST00000205145 325 ntBASIC13.95□□□□□ -0.18
Pif1Q80SX8 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.95□□□□□ -0.18
Pif1Q80SX8 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.95□□□□□ -0.18
Pif1Q80SX8 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pif1Q80SX8 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pif1Q80SX8 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pif1Q80SX8 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pif1Q80SX8 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pif1Q80SX8 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.95□□□□□ -0.18
Pif1Q80SX8 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pif1Q80SX8 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pif1Q80SX8 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pif1Q80SX8 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pif1Q80SX8 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pif1Q80SX8 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms