Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vma21Q78T54 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.35□□□□□ -0.43
Vma21Q78T54 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.35□□□□□ -0.43
Vma21Q78T54 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vma21Q78T54 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vma21Q78T54 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vma21Q78T54 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Vma21Q78T54 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vma21Q78T54 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vma21Q78T54 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vma21Q78T54 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.35□□□□□ -0.43
Vma21Q78T54 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vma21Q78T54 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vma21Q78T54 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Vma21Q78T54 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vma21Q78T54 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Vma21Q78T54 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vma21Q78T54 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vma21Q78T54 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vma21Q78T54 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vma21Q78T54 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Vma21Q78T54 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Vma21Q78T54 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Vma21Q78T54 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vma21Q78T54 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vma21Q78T54 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vma21Q78T54 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Vma21Q78T54 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vma21Q78T54 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.34□□□□□ -0.43
Vma21Q78T54 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Vma21Q78T54 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.34□□□□□ -0.43
Vma21Q78T54 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.34□□□□□ -0.43
Vma21Q78T54 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Vma21Q78T54 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Vma21Q78T54 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Vma21Q78T54 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.34□□□□□ -0.43
Vma21Q78T54 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.34□□□□□ -0.43
Vma21Q78T54 Gm18622-201ENSMUST00000219361 595 ntBASIC12.34□□□□□ -0.43
Vma21Q78T54 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vma21Q78T54 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vma21Q78T54 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vma21Q78T54 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Vma21Q78T54 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vma21Q78T54 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vma21Q78T54 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vma21Q78T54 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vma21Q78T54 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vma21Q78T54 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vma21Q78T54 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.34□□□□□ -0.43
Vma21Q78T54 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vma21Q78T54 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vma21Q78T54 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.34□□□□□ -0.43
Vma21Q78T54 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vma21Q78T54 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vma21Q78T54 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Vma21Q78T54 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vma21Q78T54 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vma21Q78T54 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vma21Q78T54 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vma21Q78T54 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vma21Q78T54 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vma21Q78T54 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vma21Q78T54 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.33□□□□□ -0.43
Vma21Q78T54 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vma21Q78T54 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vma21Q78T54 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vma21Q78T54 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vma21Q78T54 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vma21Q78T54 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.33□□□□□ -0.44
Vma21Q78T54 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vma21Q78T54 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vma21Q78T54 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vma21Q78T54 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Vma21Q78T54 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vma21Q78T54 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Vma21Q78T54 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.33□□□□□ -0.44
Vma21Q78T54 Olfr129-201ENSMUST00000122318 993 ntBASIC12.33□□□□□ -0.44
Vma21Q78T54 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.33□□□□□ -0.44
Vma21Q78T54 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.33□□□□□ -0.44
Vma21Q78T54 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.33□□□□□ -0.44
Vma21Q78T54 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vma21Q78T54 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.33□□□□□ -0.44
Vma21Q78T54 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vma21Q78T54 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vma21Q78T54 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vma21Q78T54 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vma21Q78T54 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Vma21Q78T54 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vma21Q78T54 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Vma21Q78T54 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Vma21Q78T54 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vma21Q78T54 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vma21Q78T54 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vma21Q78T54 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vma21Q78T54 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vma21Q78T54 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vma21Q78T54 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vma21Q78T54 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vma21Q78T54 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vma21Q78T54 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms