Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Npc1l1Q6T3U4 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Npc1l1Q6T3U4 Fgf17-202ENSMUST00000227123 1336 ntBASIC18.09■□□□□ 0.49
Npc1l1Q6T3U4 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Npc1l1Q6T3U4 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.09■□□□□ 0.49
Npc1l1Q6T3U4 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Npc1l1Q6T3U4 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Npc1l1Q6T3U4 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC18.09■□□□□ 0.49
Npc1l1Q6T3U4 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC18.09■□□□□ 0.49
Npc1l1Q6T3U4 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.09■□□□□ 0.49
Npc1l1Q6T3U4 AC164567.1-201ENSMUST00000219185 960 ntBASIC18.09■□□□□ 0.49
Npc1l1Q6T3U4 CT010506.4-201ENSMUST00000225457 351 ntBASIC18.09■□□□□ 0.49
Npc1l1Q6T3U4 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Npc1l1Q6T3U4 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Npc1l1Q6T3U4 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Npc1l1Q6T3U4 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Npc1l1Q6T3U4 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Npc1l1Q6T3U4 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Npc1l1Q6T3U4 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC18.09■□□□□ 0.49
Npc1l1Q6T3U4 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Npc1l1Q6T3U4 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Npc1l1Q6T3U4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Npc1l1Q6T3U4 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Npc1l1Q6T3U4 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Npc1l1Q6T3U4 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Npc1l1Q6T3U4 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Npc1l1Q6T3U4 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Npc1l1Q6T3U4 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Npc1l1Q6T3U4 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Npc1l1Q6T3U4 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Npc1l1Q6T3U4 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Npc1l1Q6T3U4 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Npc1l1Q6T3U4 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Npc1l1Q6T3U4 Rprl2-201ENSMUST00000157150 290 ntBASIC18.08■□□□□ 0.49
Npc1l1Q6T3U4 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC18.08■□□□□ 0.49
Npc1l1Q6T3U4 Gm43125-201ENSMUST00000201724 730 ntBASIC18.08■□□□□ 0.49
Npc1l1Q6T3U4 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.08■□□□□ 0.49
Npc1l1Q6T3U4 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Npc1l1Q6T3U4 Gpr146-202ENSMUST00000053120 1040 ntBASIC18.08■□□□□ 0.49
Npc1l1Q6T3U4 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC18.08■□□□□ 0.49
Npc1l1Q6T3U4 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.49
Npc1l1Q6T3U4 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC18.08■□□□□ 0.48
Npc1l1Q6T3U4 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Npc1l1Q6T3U4 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Npc1l1Q6T3U4 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
Npc1l1Q6T3U4 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Npc1l1Q6T3U4 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Npc1l1Q6T3U4 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Npc1l1Q6T3U4 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Npc1l1Q6T3U4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Npc1l1Q6T3U4 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Npc1l1Q6T3U4 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Npc1l1Q6T3U4 Gm30437-201ENSMUST00000206086 1201 ntBASIC18.07■□□□□ 0.48
Npc1l1Q6T3U4 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Npc1l1Q6T3U4 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Npc1l1Q6T3U4 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Npc1l1Q6T3U4 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Npc1l1Q6T3U4 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Npc1l1Q6T3U4 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Npc1l1Q6T3U4 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Npc1l1Q6T3U4 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Npc1l1Q6T3U4 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Npc1l1Q6T3U4 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Npc1l1Q6T3U4 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Npc1l1Q6T3U4 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Npc1l1Q6T3U4 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Npc1l1Q6T3U4 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Npc1l1Q6T3U4 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Npc1l1Q6T3U4 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Npc1l1Q6T3U4 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Npc1l1Q6T3U4 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Npc1l1Q6T3U4 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Npc1l1Q6T3U4 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Npc1l1Q6T3U4 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Npc1l1Q6T3U4 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Npc1l1Q6T3U4 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Npc1l1Q6T3U4 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Npc1l1Q6T3U4 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Npc1l1Q6T3U4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Npc1l1Q6T3U4 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Npc1l1Q6T3U4 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC18.06■□□□□ 0.48
Npc1l1Q6T3U4 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC18.06■□□□□ 0.48
Npc1l1Q6T3U4 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC18.06■□□□□ 0.48
Npc1l1Q6T3U4 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC18.06■□□□□ 0.48
Npc1l1Q6T3U4 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Npc1l1Q6T3U4 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Npc1l1Q6T3U4 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC18.06■□□□□ 0.48
Npc1l1Q6T3U4 Gm10154-201ENSMUST00000084445 354 ntBASIC18.06■□□□□ 0.48
Npc1l1Q6T3U4 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Npc1l1Q6T3U4 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Npc1l1Q6T3U4 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Npc1l1Q6T3U4 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.06■□□□□ 0.48
Npc1l1Q6T3U4 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Npc1l1Q6T3U4 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Npc1l1Q6T3U4 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Npc1l1Q6T3U4 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Npc1l1Q6T3U4 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Npc1l1Q6T3U4 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Npc1l1Q6T3U4 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Npc1l1Q6T3U4 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms