Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Carlr-201ENSMUST00000181515 2574 ntBASIC14.96□□□□□ -0.01
Scaf4Q6PFF0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.96□□□□□ -0.01
Scaf4Q6PFF0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Scaf4Q6PFF0 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scaf4Q6PFF0 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scaf4Q6PFF0 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scaf4Q6PFF0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.96□□□□□ -0.01
Scaf4Q6PFF0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scaf4Q6PFF0 Rprl3-201ENSMUST00000157400 290 ntBASIC14.96□□□□□ -0.01
Scaf4Q6PFF0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Scaf4Q6PFF0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Scaf4Q6PFF0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scaf4Q6PFF0 Gm17808-201ENSMUST00000200859 894 ntBASIC14.96□□□□□ -0.01
Scaf4Q6PFF0 Gm18622-201ENSMUST00000219361 595 ntBASIC14.96□□□□□ -0.01
Scaf4Q6PFF0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.96□□□□□ -0.01
Scaf4Q6PFF0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scaf4Q6PFF0 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scaf4Q6PFF0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scaf4Q6PFF0 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scaf4Q6PFF0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scaf4Q6PFF0 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scaf4Q6PFF0 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Scaf4Q6PFF0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scaf4Q6PFF0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Scaf4Q6PFF0 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Scaf4Q6PFF0 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Scaf4Q6PFF0 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Scaf4Q6PFF0 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
Scaf4Q6PFF0 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Mir3081-201ENSMUST00000175305 84 ntBASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.95□□□□□ -0.02
Scaf4Q6PFF0 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Scaf4Q6PFF0 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Scaf4Q6PFF0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scaf4Q6PFF0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Scaf4Q6PFF0 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Scaf4Q6PFF0 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Scaf4Q6PFF0 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.94□□□□□ -0.02
Scaf4Q6PFF0 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scaf4Q6PFF0 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scaf4Q6PFF0 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scaf4Q6PFF0 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scaf4Q6PFF0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Scaf4Q6PFF0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Scaf4Q6PFF0 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Scaf4Q6PFF0 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scaf4Q6PFF0 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scaf4Q6PFF0 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scaf4Q6PFF0 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scaf4Q6PFF0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scaf4Q6PFF0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.94□□□□□ -0.02
Scaf4Q6PFF0 Gm8344-201ENSMUST00000119813 856 ntBASIC14.94□□□□□ -0.02
Scaf4Q6PFF0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.94□□□□□ -0.02
Scaf4Q6PFF0 Gm29518-201ENSMUST00000190858 372 ntBASIC14.94□□□□□ -0.02
Scaf4Q6PFF0 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scaf4Q6PFF0 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scaf4Q6PFF0 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scaf4Q6PFF0 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Scaf4Q6PFF0 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scaf4Q6PFF0 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Scaf4Q6PFF0 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Scaf4Q6PFF0 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Scaf4Q6PFF0 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scaf4Q6PFF0 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.93□□□□□ -0.02
Scaf4Q6PFF0 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms