Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC19.53■□□□□ 0.72
Chd4Q6PDQ2 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chd4Q6PDQ2 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC19.53■□□□□ 0.72
Chd4Q6PDQ2 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Chd4Q6PDQ2 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chd4Q6PDQ2 Gm42901-201ENSMUST00000197735 3171 ntBASIC19.53■□□□□ 0.72
Chd4Q6PDQ2 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chd4Q6PDQ2 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Chd4Q6PDQ2 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chd4Q6PDQ2 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chd4Q6PDQ2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chd4Q6PDQ2 BC001981-202ENSMUST00000191393 1545 ntBASIC19.52■□□□□ 0.72
Chd4Q6PDQ2 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Chd4Q6PDQ2 Gm4204-201ENSMUST00000110798 1231 ntBASIC19.52■□□□□ 0.72
Chd4Q6PDQ2 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC19.52■□□□□ 0.72
Chd4Q6PDQ2 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Chd4Q6PDQ2 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC19.52■□□□□ 0.72
Chd4Q6PDQ2 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC19.52■□□□□ 0.72
Chd4Q6PDQ2 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC19.52■□□□□ 0.72
Chd4Q6PDQ2 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Chd4Q6PDQ2 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC19.52■□□□□ 0.72
Chd4Q6PDQ2 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC19.52■□□□□ 0.72
Chd4Q6PDQ2 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chd4Q6PDQ2 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Chd4Q6PDQ2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Chd4Q6PDQ2 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC19.52■□□□□ 0.71
Chd4Q6PDQ2 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Chd4Q6PDQ2 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Chd4Q6PDQ2 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Chd4Q6PDQ2 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Chd4Q6PDQ2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
Chd4Q6PDQ2 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chd4Q6PDQ2 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chd4Q6PDQ2 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.51■□□□□ 0.71
Chd4Q6PDQ2 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chd4Q6PDQ2 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC19.51■□□□□ 0.71
Chd4Q6PDQ2 Mir1897-201ENSMUST00000122581 272 ntBASIC19.51■□□□□ 0.71
Chd4Q6PDQ2 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Chd4Q6PDQ2 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC19.51■□□□□ 0.71
Chd4Q6PDQ2 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Chd4Q6PDQ2 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC19.51■□□□□ 0.71
Chd4Q6PDQ2 Gm45059-201ENSMUST00000205558 1077 ntBASIC19.51■□□□□ 0.71
Chd4Q6PDQ2 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Chd4Q6PDQ2 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Chd4Q6PDQ2 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Chd4Q6PDQ2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chd4Q6PDQ2 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chd4Q6PDQ2 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chd4Q6PDQ2 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chd4Q6PDQ2 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chd4Q6PDQ2 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chd4Q6PDQ2 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Chd4Q6PDQ2 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chd4Q6PDQ2 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chd4Q6PDQ2 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chd4Q6PDQ2 AC130829.1-201ENSMUST00000221548 494 ntBASIC19.51■□□□□ 0.71
Chd4Q6PDQ2 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Chd4Q6PDQ2 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chd4Q6PDQ2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chd4Q6PDQ2 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC19.5■□□□□ 0.71
Chd4Q6PDQ2 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd4Q6PDQ2 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Chd4Q6PDQ2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Chd4Q6PDQ2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd4Q6PDQ2 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd4Q6PDQ2 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd4Q6PDQ2 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd4Q6PDQ2 Gm14042-201ENSMUST00000120139 833 ntBASIC19.5■□□□□ 0.71
Chd4Q6PDQ2 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Chd4Q6PDQ2 Gm21854-201ENSMUST00000179901 471 ntBASIC19.5■□□□□ 0.71
Chd4Q6PDQ2 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd4Q6PDQ2 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Chd4Q6PDQ2 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Chd4Q6PDQ2 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Chd4Q6PDQ2 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC19.5■□□□□ 0.71
Chd4Q6PDQ2 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Chd4Q6PDQ2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd4Q6PDQ2 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Chd4Q6PDQ2 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd4Q6PDQ2 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chd4Q6PDQ2 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chd4Q6PDQ2 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chd4Q6PDQ2 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Chd4Q6PDQ2 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Chd4Q6PDQ2 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chd4Q6PDQ2 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
Chd4Q6PDQ2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Chd4Q6PDQ2 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chd4Q6PDQ2 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Chd4Q6PDQ2 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chd4Q6PDQ2 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chd4Q6PDQ2 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chd4Q6PDQ2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chd4Q6PDQ2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Chd4Q6PDQ2 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Chd4Q6PDQ2 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chd4Q6PDQ2 Cd63-ps-201ENSMUST00000145417 875 ntBASIC19.49■□□□□ 0.71
Chd4Q6PDQ2 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Chd4Q6PDQ2 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chd4Q6PDQ2 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms