Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rtl3Q6P1Y1 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rtl3Q6P1Y1 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.64■□□□□ 0.09
Rtl3Q6P1Y1 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.64■□□□□ 0.09
Rtl3Q6P1Y1 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rtl3Q6P1Y1 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rtl3Q6P1Y1 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rtl3Q6P1Y1 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rtl3Q6P1Y1 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rtl3Q6P1Y1 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.64■□□□□ 0.09
Rtl3Q6P1Y1 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Rtl3Q6P1Y1 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rtl3Q6P1Y1 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rtl3Q6P1Y1 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtl3Q6P1Y1 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtl3Q6P1Y1 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rtl3Q6P1Y1 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtl3Q6P1Y1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtl3Q6P1Y1 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtl3Q6P1Y1 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtl3Q6P1Y1 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtl3Q6P1Y1 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtl3Q6P1Y1 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtl3Q6P1Y1 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rtl3Q6P1Y1 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rtl3Q6P1Y1 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtl3Q6P1Y1 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.63■□□□□ 0.09
Rtl3Q6P1Y1 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Rtl3Q6P1Y1 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.63■□□□□ 0.09
Rtl3Q6P1Y1 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.63■□□□□ 0.09
Rtl3Q6P1Y1 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.63■□□□□ 0.09
Rtl3Q6P1Y1 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.63■□□□□ 0.09
Rtl3Q6P1Y1 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.63■□□□□ 0.09
Rtl3Q6P1Y1 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtl3Q6P1Y1 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rtl3Q6P1Y1 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Rtl3Q6P1Y1 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.63■□□□□ 0.09
Rtl3Q6P1Y1 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rtl3Q6P1Y1 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtl3Q6P1Y1 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtl3Q6P1Y1 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtl3Q6P1Y1 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rtl3Q6P1Y1 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
Rtl3Q6P1Y1 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rtl3Q6P1Y1 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Rtl3Q6P1Y1 Sybu-209ENSMUST00000228639 4113 ntBASIC15.62■□□□□ 0.09
Rtl3Q6P1Y1 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Rtl3Q6P1Y1 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.62■□□□□ 0.09
Rtl3Q6P1Y1 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rtl3Q6P1Y1 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Rtl3Q6P1Y1 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rtl3Q6P1Y1 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Rtl3Q6P1Y1 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rtl3Q6P1Y1 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rtl3Q6P1Y1 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rtl3Q6P1Y1 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rtl3Q6P1Y1 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rtl3Q6P1Y1 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rtl3Q6P1Y1 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Rtl3Q6P1Y1 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rtl3Q6P1Y1 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rtl3Q6P1Y1 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rtl3Q6P1Y1 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rtl3Q6P1Y1 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rtl3Q6P1Y1 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rtl3Q6P1Y1 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Rtl3Q6P1Y1 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rtl3Q6P1Y1 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rtl3Q6P1Y1 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rtl3Q6P1Y1 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rtl3Q6P1Y1 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Rtl3Q6P1Y1 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.62■□□□□ 0.09
Rtl3Q6P1Y1 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rtl3Q6P1Y1 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Rtl3Q6P1Y1 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.62■□□□□ 0.09
Rtl3Q6P1Y1 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rtl3Q6P1Y1 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rtl3Q6P1Y1 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rtl3Q6P1Y1 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rtl3Q6P1Y1 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Rtl3Q6P1Y1 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rtl3Q6P1Y1 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Rtl3Q6P1Y1 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Rtl3Q6P1Y1 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.61■□□□□ 0.09
Rtl3Q6P1Y1 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rtl3Q6P1Y1 Gm26308-201ENSMUST00000157768 69 ntBASIC15.61■□□□□ 0.09
Rtl3Q6P1Y1 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.61■□□□□ 0.09
Rtl3Q6P1Y1 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.61■□□□□ 0.09
Rtl3Q6P1Y1 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.61■□□□□ 0.09
Rtl3Q6P1Y1 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rtl3Q6P1Y1 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rtl3Q6P1Y1 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rtl3Q6P1Y1 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rtl3Q6P1Y1 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rtl3Q6P1Y1 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rtl3Q6P1Y1 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rtl3Q6P1Y1 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rtl3Q6P1Y1 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Rtl3Q6P1Y1 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rtl3Q6P1Y1 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms