Protein–RNA interactions for Protein: Q6NZK8

Ptpdc1, Protein tyrosine phosphatase domain-containing protein 1, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpdc1Q6NZK8 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.4■□□□□ 0.54
Ptpdc1Q6NZK8 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ptpdc1Q6NZK8 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ptpdc1Q6NZK8 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
Ptpdc1Q6NZK8 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ptpdc1Q6NZK8 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Ptpdc1Q6NZK8 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ptpdc1Q6NZK8 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ptpdc1Q6NZK8 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ptpdc1Q6NZK8 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ptpdc1Q6NZK8 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ptpdc1Q6NZK8 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ptpdc1Q6NZK8 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ptpdc1Q6NZK8 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ptpdc1Q6NZK8 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ptpdc1Q6NZK8 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ptpdc1Q6NZK8 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ptpdc1Q6NZK8 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ptpdc1Q6NZK8 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ptpdc1Q6NZK8 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ptpdc1Q6NZK8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ptpdc1Q6NZK8 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ptpdc1Q6NZK8 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.39■□□□□ 0.53
Ptpdc1Q6NZK8 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ptpdc1Q6NZK8 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ptpdc1Q6NZK8 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.39■□□□□ 0.53
Ptpdc1Q6NZK8 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.39■□□□□ 0.53
Ptpdc1Q6NZK8 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.39■□□□□ 0.53
Ptpdc1Q6NZK8 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ptpdc1Q6NZK8 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ptpdc1Q6NZK8 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ptpdc1Q6NZK8 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ptpdc1Q6NZK8 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ptpdc1Q6NZK8 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ptpdc1Q6NZK8 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ptpdc1Q6NZK8 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ptpdc1Q6NZK8 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ptpdc1Q6NZK8 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ptpdc1Q6NZK8 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ptpdc1Q6NZK8 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ptpdc1Q6NZK8 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ptpdc1Q6NZK8 Gm43195-201ENSMUST00000200614 2332 ntBASIC18.38■□□□□ 0.53
Ptpdc1Q6NZK8 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC18.38■□□□□ 0.53
Ptpdc1Q6NZK8 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ptpdc1Q6NZK8 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ptpdc1Q6NZK8 Gm27300-201ENSMUST00000184085 97 ntBASIC18.38■□□□□ 0.53
Ptpdc1Q6NZK8 Gm27335-201ENSMUST00000184758 97 ntBASIC18.38■□□□□ 0.53
Ptpdc1Q6NZK8 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ptpdc1Q6NZK8 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ptpdc1Q6NZK8 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ptpdc1Q6NZK8 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ptpdc1Q6NZK8 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ptpdc1Q6NZK8 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.38■□□□□ 0.53
Ptpdc1Q6NZK8 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ptpdc1Q6NZK8 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ptpdc1Q6NZK8 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ptpdc1Q6NZK8 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ptpdc1Q6NZK8 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ptpdc1Q6NZK8 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ptpdc1Q6NZK8 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ptpdc1Q6NZK8 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ptpdc1Q6NZK8 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC18.37■□□□□ 0.53
Ptpdc1Q6NZK8 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ptpdc1Q6NZK8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC18.37■□□□□ 0.53
Ptpdc1Q6NZK8 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Ptpdc1Q6NZK8 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Ptpdc1Q6NZK8 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ptpdc1Q6NZK8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ptpdc1Q6NZK8 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ptpdc1Q6NZK8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ptpdc1Q6NZK8 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ptpdc1Q6NZK8 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ptpdc1Q6NZK8 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ptpdc1Q6NZK8 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ptpdc1Q6NZK8 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ptpdc1Q6NZK8 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ptpdc1Q6NZK8 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.37■□□□□ 0.53
Ptpdc1Q6NZK8 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Ptpdc1Q6NZK8 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ptpdc1Q6NZK8 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.37■□□□□ 0.53
Ptpdc1Q6NZK8 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ptpdc1Q6NZK8 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Ptpdc1Q6NZK8 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ptpdc1Q6NZK8 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ptpdc1Q6NZK8 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ptpdc1Q6NZK8 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ptpdc1Q6NZK8 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.37■□□□□ 0.53
Ptpdc1Q6NZK8 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
Ptpdc1Q6NZK8 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ptpdc1Q6NZK8 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ptpdc1Q6NZK8 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Ptpdc1Q6NZK8 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ptpdc1Q6NZK8 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Ptpdc1Q6NZK8 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Ptpdc1Q6NZK8 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Ptpdc1Q6NZK8 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ptpdc1Q6NZK8 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC18.36■□□□□ 0.53
Ptpdc1Q6NZK8 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Ptpdc1Q6NZK8 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ptpdc1Q6NZK8 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms