Protein–RNA interactions for Protein: Q6NWW9

Fndc3b, Fibronectin type III domain-containing protein 3B, mousemouse

Known RBP Predictions only

Length 1,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc3bQ6NWW9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fndc3bQ6NWW9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.8■□□□□ 0.28
Fndc3bQ6NWW9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fndc3bQ6NWW9 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.8■□□□□ 0.28
Fndc3bQ6NWW9 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Fndc3bQ6NWW9 Gm14928-201ENSMUST00000120198 477 ntBASIC16.8■□□□□ 0.28
Fndc3bQ6NWW9 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.8■□□□□ 0.28
Fndc3bQ6NWW9 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Fndc3bQ6NWW9 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC16.8■□□□□ 0.28
Fndc3bQ6NWW9 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC16.8■□□□□ 0.28
Fndc3bQ6NWW9 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fndc3bQ6NWW9 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fndc3bQ6NWW9 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fndc3bQ6NWW9 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.8■□□□□ 0.28
Fndc3bQ6NWW9 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fndc3bQ6NWW9 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.8■□□□□ 0.28
Fndc3bQ6NWW9 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fndc3bQ6NWW9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fndc3bQ6NWW9 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fndc3bQ6NWW9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fndc3bQ6NWW9 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Fndc3bQ6NWW9 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Fndc3bQ6NWW9 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fndc3bQ6NWW9 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.8■□□□□ 0.28
Fndc3bQ6NWW9 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fndc3bQ6NWW9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fndc3bQ6NWW9 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fndc3bQ6NWW9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fndc3bQ6NWW9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Fndc3bQ6NWW9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Fndc3bQ6NWW9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fndc3bQ6NWW9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.79■□□□□ 0.28
Fndc3bQ6NWW9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Fndc3bQ6NWW9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fndc3bQ6NWW9 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.79■□□□□ 0.28
Fndc3bQ6NWW9 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.79■□□□□ 0.28
Fndc3bQ6NWW9 Gm12859-201ENSMUST00000117834 427 ntBASIC16.79■□□□□ 0.28
Fndc3bQ6NWW9 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Fndc3bQ6NWW9 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.79■□□□□ 0.28
Fndc3bQ6NWW9 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Fndc3bQ6NWW9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fndc3bQ6NWW9 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fndc3bQ6NWW9 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fndc3bQ6NWW9 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fndc3bQ6NWW9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Fndc3bQ6NWW9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Fndc3bQ6NWW9 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Fndc3bQ6NWW9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fndc3bQ6NWW9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Fndc3bQ6NWW9 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Fndc3bQ6NWW9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fndc3bQ6NWW9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Fndc3bQ6NWW9 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fndc3bQ6NWW9 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.78■□□□□ 0.28
Fndc3bQ6NWW9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fndc3bQ6NWW9 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fndc3bQ6NWW9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Fndc3bQ6NWW9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fndc3bQ6NWW9 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fndc3bQ6NWW9 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.78■□□□□ 0.28
Fndc3bQ6NWW9 Gm14127-201ENSMUST00000117906 678 ntBASIC16.78■□□□□ 0.28
Fndc3bQ6NWW9 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.78■□□□□ 0.28
Fndc3bQ6NWW9 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.78■□□□□ 0.28
Fndc3bQ6NWW9 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.78■□□□□ 0.28
Fndc3bQ6NWW9 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC16.78■□□□□ 0.28
Fndc3bQ6NWW9 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fndc3bQ6NWW9 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fndc3bQ6NWW9 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fndc3bQ6NWW9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.78■□□□□ 0.28
Fndc3bQ6NWW9 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fndc3bQ6NWW9 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fndc3bQ6NWW9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Fndc3bQ6NWW9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fndc3bQ6NWW9 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fndc3bQ6NWW9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fndc3bQ6NWW9 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fndc3bQ6NWW9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Fndc3bQ6NWW9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fndc3bQ6NWW9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Fndc3bQ6NWW9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fndc3bQ6NWW9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fndc3bQ6NWW9 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Fndc3bQ6NWW9 Mir1897-201ENSMUST00000122581 272 ntBASIC16.77■□□□□ 0.28
Fndc3bQ6NWW9 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Fndc3bQ6NWW9 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.28
Fndc3bQ6NWW9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fndc3bQ6NWW9 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.77■□□□□ 0.28
Fndc3bQ6NWW9 AC238811.1-201ENSMUST00000225302 441 ntBASIC16.77■□□□□ 0.28
Fndc3bQ6NWW9 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fndc3bQ6NWW9 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fndc3bQ6NWW9 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Fndc3bQ6NWW9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Fndc3bQ6NWW9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Fndc3bQ6NWW9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Fndc3bQ6NWW9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Fndc3bQ6NWW9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Fndc3bQ6NWW9 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.77■□□□□ 0.27
Fndc3bQ6NWW9 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.77■□□□□ 0.27
Fndc3bQ6NWW9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Fndc3bQ6NWW9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms