Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Cpsf6Q6NVF9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cpsf6Q6NVF9 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cpsf6Q6NVF9 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cpsf6Q6NVF9 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Cpsf6Q6NVF9 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf6Q6NVF9 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf6Q6NVF9 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Cpsf6Q6NVF9 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf6Q6NVF9 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Cpsf6Q6NVF9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Cpsf6Q6NVF9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.7□□□□□ -0.06
Cpsf6Q6NVF9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf6Q6NVF9 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf6Q6NVF9 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.7□□□□□ -0.06
Cpsf6Q6NVF9 Gm27459-201ENSMUST00000184860 107 ntBASIC14.7□□□□□ -0.06
Cpsf6Q6NVF9 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.7□□□□□ -0.06
Cpsf6Q6NVF9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf6Q6NVF9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf6Q6NVF9 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf6Q6NVF9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf6Q6NVF9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf6Q6NVF9 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf6Q6NVF9 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf6Q6NVF9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf6Q6NVF9 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.7□□□□□ -0.06
Cpsf6Q6NVF9 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf6Q6NVF9 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Cpsf6Q6NVF9 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf6Q6NVF9 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf6Q6NVF9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf6Q6NVF9 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 Gm24589-201ENSMUST00000116692 94 ntBASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 Gm10819-201ENSMUST00000099988 561 ntBASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Cpsf6Q6NVF9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf6Q6NVF9 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf6Q6NVF9 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf6Q6NVF9 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Cpsf6Q6NVF9 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf6Q6NVF9 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.68□□□□□ -0.06
Cpsf6Q6NVF9 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf6Q6NVF9 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Cpsf6Q6NVF9 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf6Q6NVF9 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Cpsf6Q6NVF9 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf6Q6NVF9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf6Q6NVF9 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf6Q6NVF9 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf6Q6NVF9 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf6Q6NVF9 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.68□□□□□ -0.06
Cpsf6Q6NVF9 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf6Q6NVF9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf6Q6NVF9 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf6Q6NVF9 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf6Q6NVF9 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.67□□□□□ -0.06
Cpsf6Q6NVF9 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf6Q6NVF9 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf6Q6NVF9 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.67□□□□□ -0.06
Cpsf6Q6NVF9 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf6Q6NVF9 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf6Q6NVF9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf6Q6NVF9 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.67□□□□□ -0.06
Cpsf6Q6NVF9 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.67□□□□□ -0.06
Cpsf6Q6NVF9 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf6Q6NVF9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.67□□□□□ -0.06
Cpsf6Q6NVF9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms