Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scube3Q66PY1 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Scube3Q66PY1 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scube3Q66PY1 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Scube3Q66PY1 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.9■□□□□ 0.14
Scube3Q66PY1 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Scube3Q66PY1 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.9■□□□□ 0.14
Scube3Q66PY1 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.9■□□□□ 0.14
Scube3Q66PY1 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scube3Q66PY1 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scube3Q66PY1 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Scube3Q66PY1 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scube3Q66PY1 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scube3Q66PY1 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Scube3Q66PY1 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Scube3Q66PY1 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scube3Q66PY1 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.9■□□□□ 0.14
Scube3Q66PY1 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scube3Q66PY1 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Scube3Q66PY1 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scube3Q66PY1 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scube3Q66PY1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scube3Q66PY1 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scube3Q66PY1 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Scube3Q66PY1 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scube3Q66PY1 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scube3Q66PY1 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Scube3Q66PY1 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scube3Q66PY1 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.89■□□□□ 0.13
Scube3Q66PY1 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.89■□□□□ 0.13
Scube3Q66PY1 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.89■□□□□ 0.13
Scube3Q66PY1 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scube3Q66PY1 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scube3Q66PY1 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scube3Q66PY1 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scube3Q66PY1 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scube3Q66PY1 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.89■□□□□ 0.13
Scube3Q66PY1 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.89■□□□□ 0.13
Scube3Q66PY1 Gm11594-201ENSMUST00000122313 162 ntBASIC15.89■□□□□ 0.13
Scube3Q66PY1 Mir3113-201ENSMUST00000175478 76 ntBASIC15.89■□□□□ 0.13
Scube3Q66PY1 Mir8117-201ENSMUST00000184773 107 ntBASIC15.89■□□□□ 0.13
Scube3Q66PY1 Gm2213-201ENSMUST00000197485 688 ntBASIC15.89■□□□□ 0.13
Scube3Q66PY1 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.89■□□□□ 0.13
Scube3Q66PY1 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Scube3Q66PY1 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scube3Q66PY1 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Scube3Q66PY1 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Scube3Q66PY1 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Scube3Q66PY1 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Scube3Q66PY1 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Scube3Q66PY1 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scube3Q66PY1 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scube3Q66PY1 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scube3Q66PY1 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scube3Q66PY1 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scube3Q66PY1 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scube3Q66PY1 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scube3Q66PY1 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Scube3Q66PY1 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scube3Q66PY1 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scube3Q66PY1 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scube3Q66PY1 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scube3Q66PY1 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Scube3Q66PY1 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scube3Q66PY1 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scube3Q66PY1 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scube3Q66PY1 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scube3Q66PY1 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Scube3Q66PY1 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.88■□□□□ 0.13
Scube3Q66PY1 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Scube3Q66PY1 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.88■□□□□ 0.13
Scube3Q66PY1 Gm12008-201ENSMUST00000117791 755 ntBASIC15.88■□□□□ 0.13
Scube3Q66PY1 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scube3Q66PY1 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.88■□□□□ 0.13
Scube3Q66PY1 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.88■□□□□ 0.13
Scube3Q66PY1 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scube3Q66PY1 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scube3Q66PY1 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.88■□□□□ 0.13
Scube3Q66PY1 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Scube3Q66PY1 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scube3Q66PY1 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Scube3Q66PY1 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Scube3Q66PY1 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Scube3Q66PY1 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scube3Q66PY1 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scube3Q66PY1 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scube3Q66PY1 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Scube3Q66PY1 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scube3Q66PY1 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scube3Q66PY1 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.87■□□□□ 0.13
Scube3Q66PY1 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scube3Q66PY1 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Scube3Q66PY1 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
Scube3Q66PY1 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scube3Q66PY1 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
Scube3Q66PY1 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scube3Q66PY1 Gm5177-201ENSMUST00000183092 997 ntBASIC15.87■□□□□ 0.13
Scube3Q66PY1 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.87■□□□□ 0.13
Scube3Q66PY1 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scube3Q66PY1 Celf4-206ENSMUST00000224553 1729 ntBASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms