Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn1Q64347 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn1Q64347 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn1Q64347 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn1Q64347 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC19.14■□□□□ 0.65
Clcn1Q64347 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn1Q64347 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn1Q64347 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
Clcn1Q64347 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Clcn1Q64347 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn1Q64347 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn1Q64347 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn1Q64347 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.14■□□□□ 0.65
Clcn1Q64347 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn1Q64347 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn1Q64347 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn1Q64347 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn1Q64347 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Clcn1Q64347 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn1Q64347 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn1Q64347 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Clcn1Q64347 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Clcn1Q64347 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC19.13■□□□□ 0.65
Clcn1Q64347 AC125206.2-201ENSMUST00000217454 574 ntBASIC19.13■□□□□ 0.65
Clcn1Q64347 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC19.13■□□□□ 0.65
Clcn1Q64347 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn1Q64347 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn1Q64347 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC19.13■□□□□ 0.65
Clcn1Q64347 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn1Q64347 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Clcn1Q64347 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Clcn1Q64347 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Clcn1Q64347 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn1Q64347 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn1Q64347 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn1Q64347 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Clcn1Q64347 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Clcn1Q64347 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn1Q64347 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn1Q64347 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Clcn1Q64347 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn1Q64347 AC159621.2-201ENSMUST00000223519 1326 ntBASIC19.12■□□□□ 0.65
Clcn1Q64347 Gm25287-201ENSMUST00000103846 110 ntBASIC19.12■□□□□ 0.65
Clcn1Q64347 Gm22918-201ENSMUST00000103855 110 ntBASIC19.12■□□□□ 0.65
Clcn1Q64347 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC19.12■□□□□ 0.65
Clcn1Q64347 Gm5745-201ENSMUST00000183748 313 ntBASIC19.12■□□□□ 0.65
Clcn1Q64347 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC19.12■□□□□ 0.65
Clcn1Q64347 Rbfox2-208ENSMUST00000227930 1218 ntBASIC19.12■□□□□ 0.65
Clcn1Q64347 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn1Q64347 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn1Q64347 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn1Q64347 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn1Q64347 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn1Q64347 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.12■□□□□ 0.65
Clcn1Q64347 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn1Q64347 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Clcn1Q64347 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn1Q64347 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn1Q64347 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn1Q64347 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn1Q64347 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn1Q64347 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Clcn1Q64347 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn1Q64347 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn1Q64347 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn1Q64347 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC19.11■□□□□ 0.65
Clcn1Q64347 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn1Q64347 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn1Q64347 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn1Q64347 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn1Q64347 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn1Q64347 Gm6415-201ENSMUST00000118488 348 ntBASIC19.11■□□□□ 0.65
Clcn1Q64347 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn1Q64347 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC19.11■□□□□ 0.65
Clcn1Q64347 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn1Q64347 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn1Q64347 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn1Q64347 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn1Q64347 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn1Q64347 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Clcn1Q64347 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn1Q64347 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn1Q64347 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
Clcn1Q64347 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clcn1Q64347 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Clcn1Q64347 Gm45293-201ENSMUST00000209754 1812 ntBASIC19.1■□□□□ 0.65
Clcn1Q64347 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC19.1■□□□□ 0.65
Clcn1Q64347 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC19.1■□□□□ 0.65
Clcn1Q64347 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC19.1■□□□□ 0.65
Clcn1Q64347 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Clcn1Q64347 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Clcn1Q64347 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Clcn1Q64347 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
Clcn1Q64347 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clcn1Q64347 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC19.1■□□□□ 0.65
Clcn1Q64347 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clcn1Q64347 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC19.1■□□□□ 0.65
Clcn1Q64347 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Clcn1Q64347 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn1Q64347 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms