Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Gm44466-201ENSMUST00000200264 138 ntBASIC14.81□□□□□ -0.04
Six3Q62233 Gm44359-201ENSMUST00000200671 138 ntBASIC14.81□□□□□ -0.04
Six3Q62233 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.81□□□□□ -0.04
Six3Q62233 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.81□□□□□ -0.04
Six3Q62233 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six3Q62233 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six3Q62233 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six3Q62233 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.81□□□□□ -0.04
Six3Q62233 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six3Q62233 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six3Q62233 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Six3Q62233 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Six3Q62233 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Six3Q62233 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.81□□□□□ -0.04
Six3Q62233 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Six3Q62233 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Six3Q62233 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Six3Q62233 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six3Q62233 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.8□□□□□ -0.04
Six3Q62233 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six3Q62233 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.8□□□□□ -0.04
Six3Q62233 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six3Q62233 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six3Q62233 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Six3Q62233 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six3Q62233 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.8□□□□□ -0.04
Six3Q62233 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six3Q62233 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six3Q62233 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.8□□□□□ -0.04
Six3Q62233 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six3Q62233 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Six3Q62233 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.8□□□□□ -0.04
Six3Q62233 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.8□□□□□ -0.04
Six3Q62233 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six3Q62233 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six3Q62233 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six3Q62233 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six3Q62233 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six3Q62233 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.8□□□□□ -0.04
Six3Q62233 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six3Q62233 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Six3Q62233 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six3Q62233 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.8□□□□□ -0.04
Six3Q62233 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.8□□□□□ -0.04
Six3Q62233 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six3Q62233 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six3Q62233 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six3Q62233 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Six3Q62233 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six3Q62233 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
Six3Q62233 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six3Q62233 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six3Q62233 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six3Q62233 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Six3Q62233 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six3Q62233 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six3Q62233 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Six3Q62233 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Six3Q62233 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.79□□□□□ -0.04
Six3Q62233 Gm4535-201ENSMUST00000182274 558 ntBASIC14.79□□□□□ -0.04
Six3Q62233 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.79□□□□□ -0.04
Six3Q62233 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six3Q62233 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.79□□□□□ -0.04
Six3Q62233 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six3Q62233 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six3Q62233 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six3Q62233 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six3Q62233 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six3Q62233 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six3Q62233 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six3Q62233 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six3Q62233 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six3Q62233 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Six3Q62233 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.79□□□□□ -0.04
Six3Q62233 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six3Q62233 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six3Q62233 Gm10355-201ENSMUST00000097146 517 ntBASIC14.79□□□□□ -0.04
Six3Q62233 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six3Q62233 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Six3Q62233 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Six3Q62233 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six3Q62233 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six3Q62233 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Six3Q62233 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Six3Q62233 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Six3Q62233 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Six3Q62233 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.78□□□□□ -0.04
Six3Q62233 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Six3Q62233 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Six3Q62233 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.78□□□□□ -0.04
Six3Q62233 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Six3Q62233 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Six3Q62233 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Six3Q62233 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.78□□□□□ -0.04
Six3Q62233 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.78□□□□□ -0.04
Six3Q62233 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Six3Q62233 Gm13418-201ENSMUST00000119097 944 ntBASIC14.78□□□□□ -0.04
Six3Q62233 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.78□□□□□ -0.04
Six3Q62233 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.78□□□□□ -0.04
Six3Q62233 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms