Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Scn9aQ62205 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Scn9aQ62205 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.6■□□□□ 0.41
Scn9aQ62205 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn9aQ62205 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC17.6■□□□□ 0.41
Scn9aQ62205 Gm28760-201ENSMUST00000185995 736 ntBASIC17.6■□□□□ 0.41
Scn9aQ62205 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Scn9aQ62205 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC17.6■□□□□ 0.41
Scn9aQ62205 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn9aQ62205 Gm9797-201ENSMUST00000052902 613 ntBASIC17.6■□□□□ 0.41
Scn9aQ62205 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn9aQ62205 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn9aQ62205 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn9aQ62205 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Scn9aQ62205 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn9aQ62205 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn9aQ62205 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn9aQ62205 Gm6222-201ENSMUST00000120787 396 ntBASIC17.59■□□□□ 0.41
Scn9aQ62205 Gm7820-201ENSMUST00000121012 1052 ntBASIC17.59■□□□□ 0.41
Scn9aQ62205 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scn9aQ62205 Gm9229-201ENSMUST00000222777 126 ntBASIC17.59■□□□□ 0.41
Scn9aQ62205 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Scn9aQ62205 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn9aQ62205 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn9aQ62205 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Scn9aQ62205 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn9aQ62205 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Scn9aQ62205 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn9aQ62205 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn9aQ62205 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Scn9aQ62205 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scn9aQ62205 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn9aQ62205 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC17.59■□□□□ 0.41
Scn9aQ62205 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC17.59■□□□□ 0.41
Scn9aQ62205 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Scn9aQ62205 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC17.59■□□□□ 0.41
Scn9aQ62205 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scn9aQ62205 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scn9aQ62205 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Scn9aQ62205 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.58■□□□□ 0.41
Scn9aQ62205 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scn9aQ62205 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scn9aQ62205 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Scn9aQ62205 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Scn9aQ62205 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Scn9aQ62205 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scn9aQ62205 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scn9aQ62205 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn9aQ62205 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn9aQ62205 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn9aQ62205 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.4
Scn9aQ62205 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Scn9aQ62205 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.58■□□□□ 0.4
Scn9aQ62205 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn9aQ62205 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC17.58■□□□□ 0.4
Scn9aQ62205 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Scn9aQ62205 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC17.58■□□□□ 0.4
Scn9aQ62205 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Scn9aQ62205 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn9aQ62205 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.58■□□□□ 0.4
Scn9aQ62205 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Scn9aQ62205 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn9aQ62205 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC17.58■□□□□ 0.4
Scn9aQ62205 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn9aQ62205 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn9aQ62205 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn9aQ62205 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn9aQ62205 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Scn9aQ62205 Gm15678-201ENSMUST00000117573 960 ntBASIC17.57■□□□□ 0.4
Scn9aQ62205 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC17.57■□□□□ 0.4
Scn9aQ62205 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn9aQ62205 Gm10766-202ENSMUST00000194123 606 ntBASIC17.57■□□□□ 0.4
Scn9aQ62205 AC162801.1-201ENSMUST00000220612 198 ntBASIC17.57■□□□□ 0.4
Scn9aQ62205 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scn9aQ62205 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Scn9aQ62205 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scn9aQ62205 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.57■□□□□ 0.4
Scn9aQ62205 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn9aQ62205 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Scn9aQ62205 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scn9aQ62205 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC17.57■□□□□ 0.4
Scn9aQ62205 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC17.57■□□□□ 0.4
Scn9aQ62205 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn9aQ62205 Gm5035-201ENSMUST00000215581 927 ntBASIC17.57■□□□□ 0.4
Scn9aQ62205 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn9aQ62205 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn9aQ62205 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn9aQ62205 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn9aQ62205 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Scn9aQ62205 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn9aQ62205 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC17.56■□□□□ 0.4
Scn9aQ62205 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Scn9aQ62205 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scn9aQ62205 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.56■□□□□ 0.4
Scn9aQ62205 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn9aQ62205 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scn9aQ62205 Gm5303-201ENSMUST00000117943 1252 ntBASIC17.56■□□□□ 0.4
Scn9aQ62205 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC17.56■□□□□ 0.4
Scn9aQ62205 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scn9aQ62205 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms