Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.04□□□□□ -0.16
VcanQ62059 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
VcanQ62059 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VcanQ62059 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VcanQ62059 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
VcanQ62059 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VcanQ62059 Gm14723-201ENSMUST00000118686 215 ntBASIC14.04□□□□□ -0.16
VcanQ62059 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.04□□□□□ -0.16
VcanQ62059 Gm9522-201ENSMUST00000182394 926 ntBASIC14.04□□□□□ -0.16
VcanQ62059 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VcanQ62059 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.04□□□□□ -0.16
VcanQ62059 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VcanQ62059 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VcanQ62059 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VcanQ62059 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VcanQ62059 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VcanQ62059 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VcanQ62059 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VcanQ62059 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VcanQ62059 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
VcanQ62059 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.03□□□□□ -0.16
VcanQ62059 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VcanQ62059 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VcanQ62059 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
VcanQ62059 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VcanQ62059 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
VcanQ62059 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VcanQ62059 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VcanQ62059 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VcanQ62059 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VcanQ62059 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VcanQ62059 Mir1897-201ENSMUST00000122581 272 ntBASIC14.03□□□□□ -0.16
VcanQ62059 Gm22902-201ENSMUST00000158488 302 ntBASIC14.03□□□□□ -0.16
VcanQ62059 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
VcanQ62059 Gm27572-201ENSMUST00000183702 255 ntBASIC14.03□□□□□ -0.16
VcanQ62059 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VcanQ62059 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
VcanQ62059 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VcanQ62059 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
VcanQ62059 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
VcanQ62059 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
VcanQ62059 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VcanQ62059 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VcanQ62059 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VcanQ62059 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.03□□□□□ -0.16
VcanQ62059 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VcanQ62059 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
VcanQ62059 Mir8109-201ENSMUST00000184375 117 ntBASIC14.03□□□□□ -0.16
VcanQ62059 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VcanQ62059 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.03□□□□□ -0.16
VcanQ62059 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
VcanQ62059 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.03□□□□□ -0.16
VcanQ62059 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VcanQ62059 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VcanQ62059 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VcanQ62059 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VcanQ62059 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VcanQ62059 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
VcanQ62059 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VcanQ62059 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
VcanQ62059 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VcanQ62059 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VcanQ62059 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VcanQ62059 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.02□□□□□ -0.16
VcanQ62059 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
VcanQ62059 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.02□□□□□ -0.16
VcanQ62059 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC14.02□□□□□ -0.16
VcanQ62059 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VcanQ62059 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.02□□□□□ -0.16
VcanQ62059 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
VcanQ62059 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VcanQ62059 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
VcanQ62059 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
VcanQ62059 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VcanQ62059 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.02□□□□□ -0.17
VcanQ62059 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.02□□□□□ -0.17
VcanQ62059 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VcanQ62059 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
VcanQ62059 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.02□□□□□ -0.17
VcanQ62059 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
VcanQ62059 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VcanQ62059 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
VcanQ62059 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VcanQ62059 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VcanQ62059 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.02□□□□□ -0.17
VcanQ62059 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VcanQ62059 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.02□□□□□ -0.17
VcanQ62059 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.02□□□□□ -0.17
VcanQ62059 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VcanQ62059 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VcanQ62059 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VcanQ62059 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VcanQ62059 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
VcanQ62059 Gm13350-201ENSMUST00000120519 479 ntBASIC14.01□□□□□ -0.17
VcanQ62059 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VcanQ62059 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.01□□□□□ -0.17
VcanQ62059 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.01□□□□□ -0.17
VcanQ62059 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
VcanQ62059 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VcanQ62059 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms