Protein–RNA interactions for Protein: Q61687

Atrx, Transcriptional regulator ATRX, mousemouse

Known RBP Predictions only

Length 2,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtrxQ61687 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
AtrxQ61687 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
AtrxQ61687 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
AtrxQ61687 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
AtrxQ61687 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
AtrxQ61687 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
AtrxQ61687 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AtrxQ61687 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AtrxQ61687 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
AtrxQ61687 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AtrxQ61687 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AtrxQ61687 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AtrxQ61687 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AtrxQ61687 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AtrxQ61687 Gm8318-201ENSMUST00000182954 872 ntBASIC13.7□□□□□ -0.22
AtrxQ61687 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AtrxQ61687 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AtrxQ61687 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.7□□□□□ -0.22
AtrxQ61687 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AtrxQ61687 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AtrxQ61687 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
AtrxQ61687 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AtrxQ61687 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
AtrxQ61687 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AtrxQ61687 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AtrxQ61687 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AtrxQ61687 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AtrxQ61687 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AtrxQ61687 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.7□□□□□ -0.22
AtrxQ61687 Gm24694-201ENSMUST00000180054 110 ntBASIC13.7□□□□□ -0.22
AtrxQ61687 Gm27663-201ENSMUST00000184839 110 ntBASIC13.7□□□□□ -0.22
AtrxQ61687 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AtrxQ61687 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AtrxQ61687 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.7□□□□□ -0.22
AtrxQ61687 Gm10154-201ENSMUST00000084445 354 ntBASIC13.7□□□□□ -0.22
AtrxQ61687 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AtrxQ61687 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AtrxQ61687 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AtrxQ61687 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AtrxQ61687 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.7□□□□□ -0.22
AtrxQ61687 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AtrxQ61687 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AtrxQ61687 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AtrxQ61687 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AtrxQ61687 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AtrxQ61687 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AtrxQ61687 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
AtrxQ61687 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AtrxQ61687 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
AtrxQ61687 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
AtrxQ61687 Gm14767-201ENSMUST00000121559 586 ntBASIC13.69□□□□□ -0.22
AtrxQ61687 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.69□□□□□ -0.22
AtrxQ61687 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AtrxQ61687 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.69□□□□□ -0.22
AtrxQ61687 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
AtrxQ61687 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AtrxQ61687 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AtrxQ61687 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AtrxQ61687 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AtrxQ61687 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AtrxQ61687 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AtrxQ61687 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
AtrxQ61687 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
AtrxQ61687 Gm6973-201ENSMUST00000117080 721 ntBASIC13.69□□□□□ -0.22
AtrxQ61687 Gm16198-201ENSMUST00000118766 670 ntBASIC13.69□□□□□ -0.22
AtrxQ61687 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.69□□□□□ -0.22
AtrxQ61687 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AtrxQ61687 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.69□□□□□ -0.22
AtrxQ61687 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AtrxQ61687 Gm45784-201ENSMUST00000188360 142 ntBASIC13.69□□□□□ -0.22
AtrxQ61687 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.69□□□□□ -0.22
AtrxQ61687 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.69□□□□□ -0.22
AtrxQ61687 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.69□□□□□ -0.22
AtrxQ61687 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
AtrxQ61687 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
AtrxQ61687 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
AtrxQ61687 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AtrxQ61687 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AtrxQ61687 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AtrxQ61687 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
AtrxQ61687 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AtrxQ61687 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AtrxQ61687 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AtrxQ61687 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AtrxQ61687 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AtrxQ61687 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AtrxQ61687 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
AtrxQ61687 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.68□□□□□ -0.22
AtrxQ61687 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.68□□□□□ -0.22
AtrxQ61687 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.68□□□□□ -0.22
AtrxQ61687 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.68□□□□□ -0.22
AtrxQ61687 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AtrxQ61687 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AtrxQ61687 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AtrxQ61687 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
AtrxQ61687 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AtrxQ61687 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AtrxQ61687 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AtrxQ61687 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
AtrxQ61687 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms