Protein–RNA interactions for Protein: Q60793

Klf4, Krueppel-like factor 4, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Klf4Q60793 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Klf4Q60793 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Klf4Q60793 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Klf4Q60793 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Klf4Q60793 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Klf4Q60793 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Klf4Q60793 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Klf4Q60793 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Klf4Q60793 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Klf4Q60793 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Klf4Q60793 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Klf4Q60793 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Klf4Q60793 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Klf4Q60793 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Klf4Q60793 Gm11764-201ENSMUST00000120221 623 ntBASIC14.26□□□□□ -0.13
Klf4Q60793 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.26□□□□□ -0.13
Klf4Q60793 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Klf4Q60793 Gm5682-201ENSMUST00000173402 505 ntBASIC14.26□□□□□ -0.13
Klf4Q60793 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Klf4Q60793 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.26□□□□□ -0.13
Klf4Q60793 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.26□□□□□ -0.13
Klf4Q60793 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Klf4Q60793 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Klf4Q60793 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Klf4Q60793 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Klf4Q60793 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Klf4Q60793 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Klf4Q60793 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Klf4Q60793 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Klf4Q60793 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Klf4Q60793 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.26□□□□□ -0.13
Klf4Q60793 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Klf4Q60793 Carlr-201ENSMUST00000181515 2574 ntBASIC14.26□□□□□ -0.13
Klf4Q60793 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Klf4Q60793 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.25□□□□□ -0.13
Klf4Q60793 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Klf4Q60793 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Klf4Q60793 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.25□□□□□ -0.13
Klf4Q60793 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Klf4Q60793 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Klf4Q60793 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Klf4Q60793 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Klf4Q60793 Gm25990-201ENSMUST00000102440 86 ntBASIC14.25□□□□□ -0.13
Klf4Q60793 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Klf4Q60793 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.25□□□□□ -0.13
Klf4Q60793 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.25□□□□□ -0.13
Klf4Q60793 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Klf4Q60793 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Klf4Q60793 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Klf4Q60793 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Klf4Q60793 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Klf4Q60793 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Klf4Q60793 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Klf4Q60793 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Klf4Q60793 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Klf4Q60793 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Klf4Q60793 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Klf4Q60793 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Klf4Q60793 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Klf4Q60793 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Klf4Q60793 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Klf4Q60793 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Klf4Q60793 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Klf4Q60793 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Klf4Q60793 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Klf4Q60793 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.24□□□□□ -0.13
Klf4Q60793 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.24□□□□□ -0.13
Klf4Q60793 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.24□□□□□ -0.13
Klf4Q60793 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Klf4Q60793 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Klf4Q60793 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Klf4Q60793 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Klf4Q60793 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.24□□□□□ -0.13
Klf4Q60793 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.24□□□□□ -0.13
Klf4Q60793 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Klf4Q60793 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Klf4Q60793 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Klf4Q60793 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Klf4Q60793 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Klf4Q60793 Gm21362-201ENSMUST00000194272 928 ntBASIC14.24□□□□□ -0.13
Klf4Q60793 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.24□□□□□ -0.13
Klf4Q60793 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.24□□□□□ -0.13
Klf4Q60793 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.24□□□□□ -0.13
Klf4Q60793 Birc2-201ENSMUST00000054878 378 ntBASIC14.24□□□□□ -0.13
Klf4Q60793 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Klf4Q60793 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Klf4Q60793 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Klf4Q60793 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Klf4Q60793 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Klf4Q60793 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Klf4Q60793 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.24□□□□□ -0.13
Klf4Q60793 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Klf4Q60793 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Klf4Q60793 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.24□□□□□ -0.13
Klf4Q60793 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Klf4Q60793 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Klf4Q60793 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Klf4Q60793 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Klf4Q60793 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Klf4Q60793 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms