Protein–RNA interactions for Protein: Q60764

Mkrn3, Probable E3 ubiquitin-protein ligase makorin-3, mousemouse

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mkrn3Q60764 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mkrn3Q60764 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mkrn3Q60764 Gm9727-201ENSMUST00000161387 555 ntBASIC17.02■□□□□ 0.32
Mkrn3Q60764 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Mkrn3Q60764 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.02■□□□□ 0.32
Mkrn3Q60764 Gm19080-201ENSMUST00000196082 550 ntBASIC17.02■□□□□ 0.32
Mkrn3Q60764 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mkrn3Q60764 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.02■□□□□ 0.32
Mkrn3Q60764 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Mkrn3Q60764 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mkrn3Q60764 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mkrn3Q60764 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Mkrn3Q60764 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Mkrn3Q60764 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mkrn3Q60764 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mkrn3Q60764 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mkrn3Q60764 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.02■□□□□ 0.31
Mkrn3Q60764 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mkrn3Q60764 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.02■□□□□ 0.31
Mkrn3Q60764 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Mkrn3Q60764 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Mkrn3Q60764 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.02■□□□□ 0.31
Mkrn3Q60764 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Gm10652-201ENSMUST00000199790 2622 ntBASIC17.01■□□□□ 0.31
Mkrn3Q60764 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Gm21451-201ENSMUST00000111062 2775 ntBASIC17.01■□□□□ 0.31
Mkrn3Q60764 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.01■□□□□ 0.31
Mkrn3Q60764 Gm8000-201ENSMUST00000188378 592 ntBASIC17.01■□□□□ 0.31
Mkrn3Q60764 Gm37293-201ENSMUST00000191658 295 ntBASIC17.01■□□□□ 0.31
Mkrn3Q60764 Gm9723-201ENSMUST00000192100 457 ntBASIC17.01■□□□□ 0.31
Mkrn3Q60764 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mkrn3Q60764 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Mkrn3Q60764 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Mkrn3Q60764 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Mkrn3Q60764 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC17■□□□□ 0.31
Mkrn3Q60764 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17■□□□□ 0.31
Mkrn3Q60764 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC17■□□□□ 0.31
Mkrn3Q60764 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mkrn3Q60764 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mkrn3Q60764 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Mkrn3Q60764 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Mkrn3Q60764 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Mkrn3Q60764 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Mkrn3Q60764 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mkrn3Q60764 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17■□□□□ 0.31
Mkrn3Q60764 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17■□□□□ 0.31
Mkrn3Q60764 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17■□□□□ 0.31
Mkrn3Q60764 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17■□□□□ 0.31
Mkrn3Q60764 Gm9682-201ENSMUST00000197505 556 ntBASIC17■□□□□ 0.31
Mkrn3Q60764 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mkrn3Q60764 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mkrn3Q60764 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17■□□□□ 0.31
Mkrn3Q60764 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17■□□□□ 0.31
Mkrn3Q60764 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mkrn3Q60764 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mkrn3Q60764 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC17■□□□□ 0.31
Mkrn3Q60764 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mkrn3Q60764 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mkrn3Q60764 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17■□□□□ 0.31
Mkrn3Q60764 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC17■□□□□ 0.31
Mkrn3Q60764 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mkrn3Q60764 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Mkrn3Q60764 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.99■□□□□ 0.31
Mkrn3Q60764 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.99■□□□□ 0.31
Mkrn3Q60764 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mkrn3Q60764 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.99■□□□□ 0.31
Mkrn3Q60764 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms